scholarly journals Borders of Cis-Regulatory DNA Sequences Preferentially Harbor the Divergent Transcription Factor Binding Motifs in the Human Genome

2018 ◽  
Vol 9 ◽  
Author(s):  
Jia-Hsin Huang ◽  
Ryan Shun-Yuen Kwan ◽  
Zing Tsung-Yeh Tsai ◽  
Tzu-Chieh Lin ◽  
Huai-Kuang Tsai
Keyword(s):  
Transcription Factor ◽  
Human Genome ◽  
Dna Sequences ◽  
Transcription Factor Binding ◽  
Binding Motifs ◽  
Factor Binding ◽  
Regulatory Dna Sequences ◽  
Transcription Factor Binding Motifs ◽  
Divergent Transcription ◽  
Regulatory Dna

scholarly journals MEDEA: analysis of transcription factor binding motifs in accessible chromatin

2020 ◽  
Vol 30 (5) ◽  
pp. 736-748
Author(s):  
Luca Mariani ◽  
Kathryn Weinand ◽  
Stephen S. Gisselbrecht ◽  
Martha L. Bulyk
Keyword(s):  
Transcription Factor ◽  
Transcription Factor Binding ◽  
Binding Motifs ◽  
Factor Binding ◽  
Transcription Factor Binding Motifs ◽  
Accessible Chromatin

scholarly journals Negative selection maintains transcription factor binding motifs in human cancer

BMC Genomics ◽  
2016 ◽  
Vol 17 (S2) ◽  
Author(s):  
Ilya E. Vorontsov ◽  
Grigory Khimulya ◽  
Elena N. Lukianova ◽  
Daria D. Nikolaeva ◽  
Irina A. Eliseeva ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Negative Selection ◽  
Human Cancer ◽  
Transcription Factor Binding ◽  
Binding Motifs ◽  
Factor Binding ◽  
Transcription Factor Binding Motifs

scholarly journals Theoretical and empirical quality assessment of transcription factor-binding motifs

2010 ◽  
Vol 39 (3) ◽  
pp. 808-824 ◽  
Author(s):  
Alejandra Medina-Rivera ◽  
Cei Abreu-Goodger ◽  
Morgane Thomas-Chollier ◽  
Heladia Salgado ◽  
Julio Collado-Vides ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Quality Assessment ◽  
Transcription Factor Binding ◽  
Binding Motifs ◽  
Factor Binding ◽  
Transcription Factor Binding Motifs

scholarly journals An IgH Enhancer That Drives Transcription through Basic Helix-Loop-Helix and Oct Transcription Factor Binding Motifs

2001 ◽  
Vol 276 (30) ◽  
pp. 27825-27830 ◽  
Author(s):  
Christopher C. Cioffi ◽  
Darlene L. Middleton ◽  
Melanie R. Wilson ◽  
Norman W. Miller ◽  
L. William Clem ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Transcription Factor Binding ◽  
Binding Motifs ◽  
Factor Binding ◽  
Basic Helix Loop Helix ◽  
Helix Loop Helix ◽  
Transcription Factor Binding Motifs

scholarly journals Model-based Comparative Prediction of Transcription-Factor Binding Motifs in Anabolic Responses in Bone

2007 ◽  
Vol 5 (3-4) ◽  
pp. 158-165 ◽  
Author(s):  
Andy B. Chen ◽  
Kazunori Hamamura ◽  
Guohua Wang ◽  
Weirong Xing ◽  
Subburaman Mohan ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Transcription Factor Binding ◽  
Binding Motifs ◽  
Factor Binding ◽  
Model Based ◽  
Transcription Factor Binding Motifs

scholarly journals Modular discovery of monomeric and dimeric transcription factor binding motifs for large data sets

2018 ◽  
Vol 46 (8) ◽  
pp. e44-e44 ◽  
Author(s):  
Jarkko Toivonen ◽  
Teemu Kivioja ◽  
Arttu Jolma ◽  
Yimeng Yin ◽  
Jussi Taipale ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Large Data ◽  
Transcription Factor Binding ◽  
Large Data Sets ◽  
Data Sets ◽  
Binding Motifs ◽  
Factor Binding ◽  
Transcription Factor Binding Motifs
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