scholarly journals Tackling Stereochemistry in Drug Molecules with Vibrational Optical Activity

2021 ◽  
Vol 14 (9) ◽  
pp. 877
Author(s):  
Jonathan Bogaerts ◽  
Roy Aerts ◽  
Tom Vermeyen ◽  
Christian Johannessen ◽  
Wouter Herrebout ◽  
...  

Chirality plays a crucial role in drug discovery and development. As a result, a significant number of commercially available drugs are structurally dissymmetric and enantiomerically pure. The determination of the exact 3D structure of drug candidates is, consequently, of paramount importance for the pharmaceutical industry in different stages of the discovery pipeline. Traditionally the assignment of the absolute configuration of druggable molecules has been carried out by means of X-ray crystallography. Nevertheless, not all molecules are suitable for single-crystal growing. Additionally, valuable information about the conformational dynamics of drug candidates is lost in the solid state. As an alternative, vibrational optical activity (VOA) methods have emerged as powerful tools to assess the stereochemistry of drug molecules directly in solution. These methods include vibrational circular dichroism (VCD) and Raman optical activity (ROA). Despite their potential, VCD and ROA are still unheard of to many organic and medicinal chemists. Therefore, the present review aims at highlighting the recent use of VOA methods for the assignment of the absolute configuration of chiral small-molecule drugs, as well as for the structural analysis of biologics of pharmaceutical interest. A brief introduction on VCD and ROA theory and the best experimental practices for using these methods will be provided along with selected representative examples over the last five years. As VCD and ROA are commonly used in combination with quantum calculations, some guidelines will also be presented for the reliable simulation of chiroptical spectra. Special attention will be paid to the complementarity of VCD and ROA to unambiguously assess the stereochemical properties of pharmaceuticals.

2012 ◽  
Vol 7 (4) ◽  
pp. 1934578X1200700 ◽  
Author(s):  
Akira Sakamoto ◽  
Nao Ohya ◽  
Toshio Hasegawa ◽  
Hiroaki Izumi ◽  
Nakako Tokita ◽  
...  

Determining the absolute stereochemistry of organic compounds in solution remains a challenge. We investigated the use of Raman optical activity (ROA) spectroscopy to address this problem. The absolute configurations of (+)-( R)- and (-)-( S)-limonene were determined by ROA spectroscopy, which can be applied to smaller amounts of sample as compared with vibrational circular dichroism (VCD) spectroscopy. This ROA method was also applied to (+)-( E)-α-santalol and shown to be successful in the determination of the absolute configuration of this compound. ROA spectroscopy shows promise as a useful tool for determining the absolute stereochemistry of many natural compounds.


1973 ◽  
Vol 29 (6) ◽  
pp. 897-924 ◽  
Author(s):  
Jiro Tanaka ◽  
Kayoko Ozeki-Minakata ◽  
Fumio Ogura ◽  
Masazumi Nakagawa

2019 ◽  
Vol 21 (36) ◽  
pp. 19879-19889
Author(s):  
María Mar Quesada-Moreno ◽  
Juan Ramón Avilés-Moreno ◽  
Juan Jesús López-González ◽  
Fco. Javier Zúñiga ◽  
Dolores Santa María ◽  
...  

4aα (chiral) and 4aβ (achiral) polymorphs of 1H-benzotriazole are studied by X-ray crystallography, SSNMR, IR, Raman, VCD, and quantum chemical calculations. The absolute configuration of the supramolecular structure of 4aα polymorph is determined.


2015 ◽  
Vol 17 (8) ◽  
pp. 6016-6027 ◽  
Author(s):  
Shaun T. Mutter ◽  
François Zielinski ◽  
James R. Cheeseman ◽  
Christian Johannessen ◽  
Paul L. A. Popelier ◽  
...  

Raman optical activity combined with state-of-the-art computational approaches successfully probes the conformational space of two important carbohydrates.


1997 ◽  
Vol 36 (8) ◽  
pp. 885-887 ◽  
Author(s):  
Jeanne Costante ◽  
Lutz Hecht ◽  
Prasad L. Polavarapu ◽  
André Collet ◽  
Laurence D. Barron

2017 ◽  
Vol 121 (7) ◽  
pp. 1544-1551 ◽  
Author(s):  
Václav Profant ◽  
Alexandr Jegorov ◽  
Petr Bouř ◽  
Vladimír Baumruk

1989 ◽  
Vol 22 (2) ◽  
pp. 144-149 ◽  
Author(s):  
H.-g. Yang ◽  
D.-f. Zhang ◽  
W.-c. Chen ◽  
Y.-y. Li

The absolute configuration of α-LiIO3 crystals has been reinvestigated. The redetermination of the absolute configuration is in agreement with a report by Stadnicka, Glazer & Moxon [J. Appl. Cryst. (1985), 18, 237–240]. Special attention should be paid to the selection of Bijvoet pairs in these and similar crystals. The signs of the piezoelectric and pyroelectric coefficients have been verified and correlated with the spontaneous polarization. The pyroelectric coefficient p 3 was −4.4 × 10−5 C m−2 K−1 at 180 K. The correlation between the optical activity and the morphology of the crystals is discussed.


Author(s):  
Douglass F. Taber

En route to sarcandralactone A 3, Scott A. Snyder of Scripps Florida effected (Angew. Chem. Int. Ed. 2015, 54, 7842) Diels–Alder cycloaddition of the activated enone 1 to the Danishefsky diene. On exposure to trifluoroacetic acid, the adduct was unraveled to the ene dione 2. Michael N. Paddon-Row of the University of New South Wales and Michael S. Sherburn of the Australian National University prepared (Nature Chem. 2015, 7, 82) the allene 4 in enantiomerically-pure form. Sequential cycloaddition with 5 followed by 6 gave an adduct that was decarbonylated to 7. Further cycloaddition with nitro­ethylene 8 led to the pseudopterosin (−)-G-J aglycone 9. The protein–protein interaction inhibitor JBIR-22 12 contains a quaternary α-amino acid pendant to a bicyclic core. Nicholas J. Westwood of the University of St. Andrews set (Angew. Chem. Int. Ed. 2015, 54, 4046) the absolute configuration of the core 11 by using an organocatalyst to activate the cyclization of 10. Metal catalysts can also be used to set the absolute configuration of a Diels–Alder cycloaddition. In the course of establishing the structure of the marine natural prod­uct muironolide A 15, Armen Zakarian of the University of California, Santa Barbara cyclized (J. Am. Chem. Soc. 2015, 137, 5907) the enol form of 13 preferentially to the diastereomer 14. Unactivated intramolecular Diels–Alder cycloadditions have been carried out with more and more challenging substrates. A key step in the synthesis (Chem. Asian. J. 2015, 10, 427) of (−)-platencin 18 by Martin G. Banwell, also of the Australian National University, was the cyclization of 16 to 17. In another illustration of the power of the unactivated intramolecular Diels–Alder reaction, Thomas J. Maimone of the University of California, Berkeley cyclized (Angew. Chem. Int. Ed. 2015, 54, 1223) the tetraene 19 to the tricycle 20. Allylic chlo­rination followed by reductive cyclization converted 20 to chatancin 21.


Sign in / Sign up

Export Citation Format

Share Document