scholarly journals Genetic typing of Vibrio cholerae strains biovar El Tor isolated from the Caucasus region during the 1970–1998 period using MLVA-5 and wgSNP

2021 ◽  
Vol 98 (1) ◽  
pp. 46-58
Author(s):  
D. A. Kovalev ◽  
N. A. Shapakov ◽  
S. V. Pisarenko ◽  
I. V. Savel’eva ◽  
O. V. Vasil’eva ◽  
...  
2012 ◽  
Vol 17 (5) ◽  
pp. 31-35
Author(s):  
V. N. Savelyev ◽  
I. V. Savelyeva ◽  
B. V. Babenyshev ◽  
A. N. Kulichenko

In a comparative perspective studied cholera outbreak in the Caucasus due to typical toxigenic and genetically modified (hybrid) El Tor variant strains have been studied. Revealed features of the genetic structure of the genome, factors and ways of transmission of the causative agent of modern cholera El tor should be considered when improving the program of epidemiological supervision in terms of enhancing antiepidemic and prevention measures in cholera, the causative factor of which are of hybrid variants of Vibrio cholerae El tor.


Author(s):  
V. N. Savel’Ev ◽  
I. V. Savel’Eva ◽  
O. V. Vasil’Eva ◽  
B. V. Babenyshev ◽  
D. A. Kovalev ◽  
...  

, rstC genes), and 7 strains – to the genotype I. Genotypes I and II (genetically altered ones) are the hybrid variants of the El Tor biovar producing CT of the first type.


Author(s):  
VN Savelyev ◽  
DA Kovalev ◽  
IV Savelyeva ◽  
TV Taran ◽  
EI Podoprigora ◽  
...  

Summary. Introduction: The formation of highly pathogenic strains of Vibrio cholerae resistant to antibiotics determines the pathogenesis, clinical picture, epidemiology, and laboratory diagnosis of cholera. It is necessary to study the structure of the genome of V. cholerae of any serological groups isolated during routine monitoring of environmental objects or patients with acute intestinal infections in order to detect toxigenic genes inherent to epidemic strains of V. cholerae O1. Our objective was to study changes in phenotypic properties and molecular genetic bases of persistence, epidemic and pathogenetic potential of El Tor variant of Vibrio cholerae O1 isolated from patients and environmental objects in the Caucasus in 1970–1998. Materials and methods: We studied phenotypic and molecular genetic characteristics of 32 V. cholerae O1 strains isolated from patients and environmental objects in the Caucasus (1970–1998) using a microbiological assay and PCR test, respectively. Results: We established that the following biotypes of V. cholerae O1 were found in the Caucasus: a) El Tor, ctxA–, and Hly+ nontoxigenic strains of V. cholerae O1, typical in their phenotypic and molecular genetic properties. Their toxigenic potential is represented by exo- and endotoxins different from the enterotoxin of toxigenic V. cholerae; b) toxigenic El Tor, ctxABEL+, rtхC+, and Hly– variant biotypes of V. cholerae O1, typical in their phenotypic, molecular and genetic properties during outbreaks of invasive cholera, producing a CT-2 enterotoxin and containing genes responsible for persistent, pathogenic and pandemic potential, and c) typical in terms of their main phenotypic characteristics but molecularly genetically altered variants (hybrids) of El Tor variant of Vibrio cholerae O1 including El Tor ctxABCL+, rtxC+, Hly–. Conclusions: The main manifestation of evolutionary changes in a typical toxigenic vibrio of the El Tor variant biotype was the replacement of the ctxBEl gene in its genome with the ctxBCL gene encoding the classical type of enterotoxin (CT-1), which significantly increased the persistent, toxic, epidemic, and pandemic potential of genetically modified variants of El Tor biotype Vibrio cholerae. The genome of these strains contains an integrative and conjugative element SXT with genes for antibiotic multiresistance.


2021 ◽  
Vol 11 (5) ◽  
pp. 917-926
Author(s):  
I. V. Savelyeva ◽  
A. N. Kulichenko ◽  
V. N. Saveliev ◽  
D. A. Kovalev ◽  
T. V. Taran ◽  
...  

The phenotypic and molecular genetic properties of 133 strains of genetically modified (genovariant) Vibrio cholerae O1 El Tor biovar isolated from patients in Dagestan (1993, 1994, 1998), and compared with 246 strains of a typical toxigenic cholera vibrio El Tor biovar isolated in 1970–1990 at the Caucasus Region. It was found that 48.7% of the studied genetically modified strain variants had mixed phenotypic properties of the El Tor and classic biovars that evidences about a need to include the marker genes of the classical biovar (ctxBCl+, rtxC–) and the El Tor biovar (ctxBEl+, rtxC+) into the existing biotyping scheme. The genes of the El Tor biovar, isolated from patients in Dagestan, contain in addition to the El Tor ones, the genes of the classical biovar (ctxBCl and/or rstRCl), as well as the typical toxigenic cholera vibrios of El Tor, islands of persistence (EPI), pathogenicity (VPI-1 and VPI-2) and pandemicity (VSP-I and VSP-II). However, only the El Tor biovar genovariants were found to bear an integrative and conjugative SXT element with antibiotic polyresistance genes. Epidemic cholera outbreaks caused by the El Tor biovar genovariants that occurred in 1993–1998 at the Caucasus Region, correspond to classical (Asian) cholera based on disease severity. The epidemiological features of modern cholera were studied: the main way for transmission via fecal-oral route for typical El Tor cholera vibrio is waterborne, whereas for the El Tor gene variant — household. Primary infections upon water drinking and using domestic water from surface water bodies infected with typical El Tor vibrios occur outside the family hearth. In case of cholera caused by hybrid El Tor variants, infection is transmitted among family members via domestic factors under low sanitary level. The development of laboratory diagnostics and epidemiological surveillance of modern El Tor cholera is based on the development of PCR test systems taking into account the evolutionary genome transformations.


2020 ◽  
Vol 56 (9) ◽  
pp. 1055-1069
Author(s):  
N. I. Smirnova ◽  
A. A. Kritsky ◽  
J. V. Alkhova ◽  
E. Yu. Agafonova ◽  
E. Yu. Shchelkanova ◽  
...  

2012 ◽  
Vol 27 (2) ◽  
pp. 74-78 ◽  
Author(s):  
E. I. Eremenko ◽  
A. G. Ryazanova ◽  
O. I. Tsygankova ◽  
E. A. Tsygankova ◽  
N. P. Buravtseva ◽  
...  

The Lancet ◽  
1979 ◽  
Vol 314 (8134) ◽  
pp. 147-148 ◽  
Author(s):  
K.J. Towner ◽  
N.J. Pearson ◽  
F. O'Grady
Keyword(s):  

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