scholarly journals How to Measure Cortical Folding from MR Images: a Step-by-Step Tutorial to Compute Local Gyrification Index

Author(s):  
Marie Schaer ◽  
Meritxell Bach Cuadra ◽  
Nick Schmansky ◽  
Bruce Fischl ◽  
Jean-Philippe Thiran ◽  
...  
1997 ◽  
Vol 24 (1-2) ◽  
pp. 157 ◽  
Author(s):  
Martin D. Stefan ◽  
Tonmoy Sharma ◽  
Zoe Ellison ◽  
Robin Murray ◽  
Ian Everall

2018 ◽  
Vol 29 (6) ◽  
pp. 2575-2587 ◽  
Author(s):  
Lauren E Libero ◽  
Marie Schaer ◽  
Deana D Li ◽  
David G Amaral ◽  
Christine Wu Nordahl

2020 ◽  
Author(s):  
Hyuk Jin Yun ◽  
Juan David Ruiz Perez ◽  
Patricia Sosa ◽  
J Alejandro Valdés ◽  
Neel Madan ◽  
...  

Abstract Down syndrome (DS) is the most common genetic cause of developmental disabilities. Advanced analysis of brain magnetic resonance imaging (MRI) has been used to find brain abnormalities and their relationship to neurocognitive impairments in children and adolescents with DS. Because genetic factors affect brain development in early fetal life, there is a growing interest in analyzing brains from living fetuses with DS. In this study, we investigated regional sulcal folding depth as well as global cortical gyrification from fetal brain MRIs. Nine fetuses with DS (29.1 ± 4.24 gestational weeks [mean ± standard deviation]) were compared with 17 typically developing [TD] fetuses (28.4 ± 3.44). Fetuses with DS showed lower whole-brain average sulcal depths and gyrification index than TD fetuses. Significant decreases in sulcal depth were found in bilateral Sylvian fissures and right central and parieto-occipital sulci. On the other hand, significantly increased sulcal depth was shown in the left superior temporal sulcus, which is related to atypical hemispheric asymmetry of cortical folding. Moreover, these group differences increased as gestation progressed. This study demonstrates that regional sulcal depth is a sensitive marker for detecting alterations of cortical development in DS during fetal life, which may be associated with later neurocognitive impairment.


2006 ◽  
Vol 14 (7S_Part_16) ◽  
pp. P881-P882
Author(s):  
HyunChul Youn ◽  
Suji Lee ◽  
Seulki Kim ◽  
Myung Won Choi ◽  
Cheol E. Han ◽  
...  

NeuroImage ◽  
2009 ◽  
Vol 47 ◽  
pp. S175
Author(s):  
M Schaer ◽  
MC Ottet ◽  
N Schmansky ◽  
R Pienaar ◽  
D Greve ◽  
...  

2018 ◽  
Vol 48 ◽  
pp. 244-258 ◽  
Author(s):  
Ilwoo Lyu ◽  
Sun Hyung Kim ◽  
Jessica B. Girault ◽  
John H. Gilmore ◽  
Martin A. Styner

2014 ◽  
Vol 76 (6) ◽  
pp. 447-455 ◽  
Author(s):  
Pranav Nanda ◽  
Neeraj Tandon ◽  
Ian T. Mathew ◽  
Christoforos I. Giakoumatos ◽  
Hulegar A. Abhishekh ◽  
...  

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Xiaoyu Wang ◽  
Julien Lefèvre ◽  
Amine Bohi ◽  
Mariam Al Harrach ◽  
Mickael Dinomais ◽  
...  

AbstractAbnormal cortical folding patterns, such as lissencephaly, pachygyria and polymicrogyria malformations, may be related to neurodevelopmental disorders. In this context, computational modeling is a powerful tool to provide a better understanding of the early brain folding process. Recent studies based on biomechanical modeling have shown that mechanical forces play a crucial role in the formation of cortical convolutions. However, the effect of biophysical parameters in these models remain unclear. In this paper, we investigate the effect of the cortical growth, the initial geometry and the initial cortical thickness on folding patterns. In addition, we not only use several descriptors of the folds such as the dimensionless mean curvature, the surface-based three-dimensional gyrification index and the sulcal depth, but also propose a new metric to quantify the folds orientation. The results demonstrate that the cortical growth mode does almost not affect the complexity degree of surface morphology; the variation in the initial geometry changes the folds orientation and depth, and in particular, the slenderer the shape is, the more folds along its longest axis could be seen and the deeper the sulci become. Moreover, the thinner the initial cortical thickness is, the higher the spatial frequency of the folds is, but the shallower the sulci become, which is in agreement with the previously reported effects of cortical thickness.


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