scholarly journals The fruticose genera in the Ramalinaceae (Ascomycota, Lecanoromycetes): their diversity and evolutionary history

MycoKeys ◽  
2020 ◽  
Vol 73 ◽  
pp. 1-68 ◽  
Author(s):  
Richard Spjut ◽  
Antoine Simon ◽  
Martin Guissard ◽  
Nicolas Magain ◽  
Emmanuël Sérusiaux
Keyword(s):  
New Species ◽  
New Taxa ◽  
Phylogenetic Analyses ◽  
New Combination ◽  
Special Focus ◽  
Western Mexico ◽  
Coastal Desert ◽  
Species Complexes ◽  
Allopatric Species ◽  
C 30

We present phylogenetic analyses of the fruticose Ramalinaceae based on extensive collections from many parts of the world, with a special focus on the Vizcaíno deserts in north-western Mexico and the coastal desert in Namibia. We generate a four-locus DNA sequence dataset for accessions of Ramalina and two additional loci for Niebla and Vermilacinia. Four genera are strongly supported: the subcosmopolitan Ramalina, the new genus Namibialina endemic to SW Africa, and a duo formed by Niebla and Vermilacinia, endemic to the New World except the sorediate V. zebrina that disjunctly occurs in Namibia. The latter three genera are restricted to coastal desert and chaparral where vegetation depends on moisture from ocean fog. Ramalina is subcosmopolitan and much more diverse in its ecology. We show that Ramalina and its sister genus Namibialina diverged from each other at c. 48 Myrs, whereas Vermilacinia and Niebla split at c. 30 Myrs. The phylogeny of the fruticose genera remains unresolved to their ancestral crustose genera. Species delimitation within Namibialina and Ramalina is rather straightforward. The phylogeny and taxonomy of Vermilacinia are fully resolved, except for the two youngest clades of corticolous taxa, and support current taxonomy, including four new taxa described here. Secondary metabolite variation in Niebla generally coincides with major clades which are comprised of species complexes with still unresolved phylogenetic relationships. A micro-endemism pattern of allopatric species is strongly suspected for both genera, except for the corticolous taxa within Vermilacinia. Both Niebla and saxicolous Vermilacinia have chemotypes unique to species clades that are largely endemic to the Vizcaíno deserts. The following new taxa are described: Namibialinagen. nov. with N. melanothrix (comb. nov.) as type species, a single new species of Ramalina (R. krogiae) and four new species of Vermilacinia (V. breviloba, V. lacunosa, V. pustulata and V. reticulata). The new combination V. granulans is introduced. Two epithets are re-introduced for European Ramalina species: R. crispans (= R. peruviana auct. eur.) and R. rosacea (= R. bourgeana auct. p.p). A lectotype is designated for Vermilacinia procera. A key to saxicolous species of Vermilacinia is presented.

Generic classification of some more hyphomycetes with solitary conidia borne on phialides

1998 ◽  
Vol 76 (9) ◽  
pp. 1570-1583 ◽  
Author(s):  
W Gams ◽  
K O'Donnell ◽  
H -J Schroers ◽  
M Christensen
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Elongation Factor ◽  
28S Rdna ◽  
New Combination ◽  
Rdna Sequences ◽  
28S Rdna Sequences ◽  
Three New Species ◽  
Morphological Species

Unlike most phialide-producing fungi that liberate a multiplicity of conidia from each conidiogenous cell, only single conidia are formed on phialide-like conidiogenous cells in Aphanocladium, Verticimonosporium, and some species of Sibirina. A group of isolates obtained from soil of native Artemisia tridentata (sagebrush) grassland in Wyoming and from desert soil in Iraq is compared with these genera and classified as a fourth genus, Stanjemonium, honouring Stanley J. Hughes. Phylogenetic analyses of partial nuclear small- (18S) and large-subunit (28S) rDNA sequences indicate that Stanjemonium spp. form a monophyletic group with Emericellopsis. Sequences from the nuclear 18S and 28S rDNA were too conserved to resolve morphological species of Stanjemonium; however, phylogenetic analysis of b-tubulin and translation elongation factor 1a gene exons and introns resolved all species distinguished morphologically. Numerous conidiogenous cells or denticles are scattered along the cells of aerial hyphae in Aphanocladium and Stanjemonium spp., very rapidly collapsing into denticles in the former, somewhat more persistent and leaving broad scars in the latter. In Cladobotryum-Sibirina and Verticimonosporium spp., conidiogenous cells are discrete in terminal and intercalary whorls; phialides of the latter taxon are particularly swollen. The taxonomy of Aphanocladium is not yet resolved. Two species are recognized in Verticimonosporium. Three new species of Stanjemonium are described, and one new combination from Aphanocladium is proposed, along with one new species of Cladobotryum.Key words: Aphanocladium, Cladobotryum, conidiogenesis, hyphomycetes, molecular phylogeny, phialide, Stanjemonium, systematics, Verticimonosporium.

A new genus and two new species of planthopper in the tribe Cenchreini (Hemiptera: Auchenorrhyncha: Derbidae) from lowland tropical rainforest in Costa Rica

Zootaxa ◽  
2021 ◽  
Vol 4908 (3) ◽  
pp. 369-392
Author(s):  
BRIAN W. BAHDER ◽  
MARCO A. ZUMBADO ECHAVARRIA ◽  
EDWIN A. BARRANTES BARRANTES ◽  
ERICKA E. HELMICK ◽  
CHARLES R. BARTLETT
Keyword(s):  
New Species ◽  
Costa Rica ◽  
New Taxa ◽  
Type Species ◽  
New Genus ◽  
Additional Data ◽  
New Combination ◽  
Diagnostic Features ◽  
Genus Level ◽  
Two New Species

Recent survey work for planthoppers at La Selva Biological Station in Costa Rica found two new species allied with Cenchrea Westwood. The cytochrome c oxidase subunit I (COI) and 18S were sequenced for the new taxa and used these data to assess the genus-level standing of the new taxa. The new taxa do not cluster with Cenchrea dorsalis Westwood, the type species of Cenchrea. A new genus Tico gen. n. described for the reception of new species described as Tico emmettcarri sp. n. (the type species) and Tico pseudosororius sp. n. Cenchrea sororia Fennah is moved to Tico gen. n., to form the new combination Tico sororius (Fennah). Tico gen. n. is compared with allied genera, and review genus-level diagnostic features and the species composition of Cenchrea, which appears to be compositionally heterogenous, but additional data is needed to evaluate genus-level placement of most species. 

Two new phyllocoptine species and new records of eriophyoid mites (Eriophyidae, Phyllocoptinae) from Crimea, with evaluation of the phylogenetic position of the new taxa using GenBank data

2019 ◽  
Vol 24 (5) ◽  
pp. 882
Author(s):  
Philipp Chetverikov ◽  
Pavel Klimov ◽  
Viktoria Yu. Letukhova ◽  
Géza Ripka ◽  
Sarah Zukoff
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Mite Species ◽  
New Combination ◽  
Phylogenetic Position ◽  
Endemic Plant ◽  
Plant Host ◽  
Mitochondrial Coi ◽  
Rdna Sequences ◽  
Eriophyoid Mites

We describe two new species and report new occurrences for six species of eriophyid mites (Eriophyoidea: Eriophyidae) in Crimea: Abacarus denticulifer n. sp. from Agropyron cristatum (L.) Gaertn. (Poaceae), Aceria aculiformis Sukhareva 1986 from Melica ciliata L. (Poaceae), Aceria peucedani (Canestrini 1891) from Seseli tortuosum L. (Apiaceae), Anthocoptes recki (Bagdasarian 1972) n. comb. (from Tegonotus) from Pistacia atlantica subsp. mutica (Fisch. & C.A. Mey.) (Anacardiaceae), Epitrimerus inulae Farkas 1963 from Inula germanica L. (Asteraceae), Phyllocoptes sanctus n. sp. from Potentilla recta subsp. obscura (Willd.) (Rosaceae), Phyllocoptes bilobospinosus Chetverikov 2019 (in Chetverikov et al. 2019) from Tamarix spp. (Tamaricaceae), Tegoprionus dentatus (Nalepa 1891) from Galium verum L. (Rubiaceae). For an Indian phyllocoptine mite species associated with Apluda mutica L. (Poaceae), a new combination was proposed: Abacarus muticus (Sur & Chakrabarti 2017) n. comb. (from Mesalox). Mitochondrial COI and D2 28S rDNA sequences of three phyllocoptine species from Crimea were obtained: A. denticulifer n. sp. (GenBank accession numbers MK415989 and MK408623), P. bilobospinosus (MK408624), and P. sanctus n. sp. (MK415988 and MK408622). Comparison of all COI and D2 28S sequences of Eriophyoidea from GenBank showed that sequences JF920111 and JF920110 Aceria tulipae are identical to JF920101 Aceria tosichella, and D2 28S sequence KP297379 Tegolophus sp. is identical to KM111079 Shevtchenkella sp., which indicates either one or more misidentifications or sample contamination. Molecular phylogenetic analyses (a) confirmed the morphology-based assignment of A. denticulifer n. sp. to the Abacarus hystrix s.l. species complex, (b) supported the monophyly of Abacarus hystrix s.l., (c) revealed that the genera Phyllocoptes, Epitrimerus, and Calepitrimerus are paraphyletic, and (d) indicated that Phyllocoptini (including P. sanctus n. sp.), which are associated with Rosaceae and Caprifoliaceae, are monophyletic. The position of P. bilobospinosus was uncertain in all analyses. Based on the results of our study, it is recommended that descriptions of new species in large, putatively paraphyletic genera of Eriophyoidea include comparisons with mite species associated with the same plant family. Our work also provides new evidence that a species in a large complex of cryptic species could have evolved a distinct morphology if it is associated with an endemic plant host restricted to a geographically isolated area.

scholarly journals New species in Dictyosporium, new combinations in Dictyocheirospora and an updated backbone tree for Dictyosporiaceae

MycoKeys ◽  
2018 ◽  
Vol 36 ◽  
pp. 83-105 ◽  
Author(s):  
Jing Yang ◽  
Jian-Kui Liu ◽  
Kevin D. Hyde ◽  
E.B. Gareth Jones ◽  
Zuo-Yi Liu
Keyword(s):  
New Species ◽  
New Taxa ◽  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Morphological Characters ◽  
Freshwater Fungi ◽  
New Combinations ◽  
The Family ◽  
Two New Species ◽  
Backbone Tree

A survey of freshwater fungi on submerged wood in China and Thailand resulted in the collection of three species in Dictyocheirospora and four species in Dictyosporium including two new species in the latter genus. Morphological characters and phylogenetic analyses based on ITS, LSU and TEF1α sequence data support their placement in Dictyocheirospora and Dictyosporium (Dothideomycetes). An updated backbone tree is provided for the family Dothideomycetes. Descriptions and illustrations of the new taxa and re-collections are provided. Four new combinations are proposed for Dictyocheirospora.

Description of two new genera of Ochlerini (Hemiptera: Pentatomidae: Discocephalinae)

Zootaxa ◽  
2019 ◽  
Vol 4612 (3) ◽  
pp. 387
Author(s):  
THEREZA DE A. GARBELOTTO ◽  
JOCELIA GRAZIA ◽  
LUIZ ALEXANDRE CAMPOS
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
New Taxa ◽  
Female Genitalia ◽  
New Combination ◽  
New Genera ◽  
Two New Species

Since the phylogenetic analysis of the Herrichella clade (Ochlerini) new genera were described to fit monophyletic groups inferred and considered to be new taxa. The clade I supported by two synapomorphies of the female genitalia, grouped Alitocoris brunneus Sailer together to two new species. Alloeogyna gen. nov. is described here for this clade including the two new species Alloeogyna ampla sp. nov. and Alloeogyna poecila sp. nov. and a new combination is proposed for Alloeogyna brunnea comb. nov.. Also, Alitocoris maculosus Sailer recovered within the clade E in the Herrichella clade is here redescribed in the monotypic Sailerus gen. nov. resulting in the new combination Sailerus maculosus comb. nov.. 

Notes relating to the Flora of Bhutan: XVIII. New taxa and a new combination in the Labiatae

1993 ◽  
Vol 50 (1) ◽  
pp. 33-38 ◽  
Author(s):  
R. A. Clement
Keyword(s):  
New Species ◽  
New Taxa ◽  
New Combination ◽  
New Subspecies ◽  
Himalayan Mountains ◽  
Three New Species

Three new species and one new subspecies of Labiatae are described from the eastern Himalayan mountains: Isodon atroruber R. A. Clement, Anisochilus mitis R. A. Clement, Teucrium grandifolium R. A. Clement and Phlomis rotata Hook. f. subsp. bhutanica R. A. Clement. The new combination Marmoritis pharica (Prain) R. A. Clement is made.

A revision of the soft coral genus, Eunephthya Verrill, 1869 (Anthozoa: Octocorallia: Nephtheidae), with a description of four new species from South Africa

Zootaxa ◽  
2012 ◽  
Vol 3485 (1) ◽  
pp. 1 ◽  
Author(s):  
CATHERINE S. MCFADDEN ◽  
LEEN P. VAN OFWEGEN
Keyword(s):  
South Africa ◽  
New Species ◽  
Type Species ◽  
Molecular Phylogenetics ◽  
Soft Coral ◽  
Phylogenetic Analyses ◽  
28S Rdna ◽  
New Combination ◽  
Coral Genus ◽  
Molecular Phylogenetic

Based on the results of morphological and molecular phylogenetic analyses of newly collected material, we reinstate thesoft coral genus Eunephthya Verrill, 1869 for a group of species endemic to South Africa. Eunephthya is morphologicallyand phylogenetically distinct from the zooxanthellate, tropical genus Capnella Gray, 1869 with which it had been synon-ymized. In Eunephthya the polyp sclerites include unilaterally spinose or leaf spindles, and the sclerites of the stalk surfaceand interior (when present) are small radiates and spheroids. In contrast, C. imbricata, the type species of Capnella, hasleaf clubs and leaf-capstans in the polyps and stalk surface, and large ovals and irregular forms in the interior. We describefour new species of Eunephthya from Algoa Bay, South Africa—E. celata, E. ericius, E. granulata, and E. shirleyae— and propose a new combination, E. susanae.Keywords. Molecular phylogenetics, Capnella, mtMutS, COI, 28S rDNA, endemism

Studies in the genus Xanthoconium (Boletaceae). I. New species and a new combination

1987 ◽  
Vol 65 (10) ◽  
pp. 2142-2146 ◽  
Author(s):  
C. B. Wolfe Jr.
Keyword(s):  
New Species ◽  
New Taxa ◽  
New Combination ◽  
Field Investigations ◽  
Type Studies

Recent field investigations and type studies of Xanthoconium species have revealed the existence of three new taxa, Xanthoconium chattoogaensis, X. montaltoensis, and X. montanum are proposed as new. Additionally, X. affine var. reticulatum is proposed as a new combination.

scholarly journals Taxonomy and phylogeny of Sidera (Hymenochaetales, Basidiomycota): four new species and keys to species of the genus

MycoKeys ◽  
2020 ◽  
Vol 68 ◽  
pp. 115-135
Author(s):  
Rui Du ◽  
Fang Wu ◽  
Genevieve M. Gate ◽  
Yu-Cheng Dai ◽  
Xue-Mei Tian
Keyword(s):  
New Species ◽  
Ribosomal Rna ◽  
Internal Transcribed Spacer ◽  
Phylogenetic Analyses ◽  
Large Subunit ◽  
Identification Key ◽  
New Combination ◽  
Morphological Examination ◽  
Ribosomal Rna Gene ◽  
Asian Pacific

Sidera is a polypore genus with white to cream or buff basidiomata, whose species in Hymenochaetales are poorly known. We study the phylogeny and diversity of Sidera based on our recent collections from tropic and subtropic Asian-Pacific regions. Phylogenetic analyses based on the internal transcribed spacer (ITS) and nuclear large subunit (nLSU) ribosomal RNA gene regions indicate that ten terminal lineages are well supported within Sidera. Based on morphological examination and phylogeny, four new species, viz. Sidera minutissima, S. parallela, S. srilankensis and S. tenuis are described, and a new combination, Sidera minutipora, is proposed. All these species are illustrated. Sidera minutissima is characterized by tiny basidiomata with bluish pores when fresh, generative hyphae dominating at the dissepiment edges, the presence of cystidioles, and allantoid basidiospores measuring 3.8–4.4 × 0.9–1.3 μm. Sidera parallela differs from other poroid species in the genus by having parallel tramal hyphae in combination with lunate basidiospores measuring 2.8–3.3 × 0.9–1.2 μm. Sidera srilankensis have generative and skeletal hyphae co-dominating at the dissepiment edges, and lunate basidiospores measuring 3.5–4 × 1–1.3 μm. Sidera tenuis is distinguished by small pores (8–10 per mm) and relatively long allantoid basidiospores measuring 4.2–5 × 0.8–1 μm. Sidera minutipora is characterized by buff to olivaceous buff basidiomata when dry, 5–7 pores per mm, rosette-like crystals rare, and allantoid basidiospores measuring 3.7–4.3 × 1–1.3 μm. An identification key to all accepted species is provided.

A new species of Synarthonia from Luxembourg, and a new combination in the genus Reichlingia (Arthoniaceae)

2020 ◽  
Vol 52 (4) ◽  
pp. 261-266
Author(s):  
Damien Ertz ◽  
André Aptroot ◽  
Neil Sanderson ◽  
Brian Coppins ◽  
Dries Van den Broeck ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Lichen Species ◽  
Sister Species ◽  
New Combination ◽  
A New Species

AbstractA new species of Synarthonia, S. leproidica, is described from Luxembourg. Phylogenetic analyses of mtSSU and RPB2 sequences were used to determine the generic affiliation of this sterile species. Synarthonia leproidica differs from all other species of the genus by the combination of a leproid thallus and the production of psoromic acid. It is the sister species to S. muriformis in our phylogenetic analyses. The discovery of the new species suggests that other strictly sorediate lichen species might have been overlooked in Europe, even in intensely explored countries such as Luxembourg. Phylogenetic analyses further confirm the placement of Reichlingia anombrophila in the genus Reichlingia and of Synarthonia astroidestera in the genus Synarthonia. Arthonia atlantica is transferred to the genus Reichlingia as R. dendritica.

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