scholarly journals Sediment release of dissolved organic matter to the oxygen minimum zone off Peru

2020 ◽  
Vol 17 (18) ◽  
pp. 4663-4679
Author(s):  
Alexandra N. Loginova ◽  
Andrew W. Dale ◽  
Frédéric A. C. Le Moigne ◽  
Sören Thomsen ◽  
Stefan Sommer ◽  
...  
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Pore Water ◽  
Nitrogen Loss ◽  
Oxygen Minimum Zone ◽  
Water Interface ◽  
Sediment Release ◽  
Minimum Zone ◽  
Oxygen Minimum

Abstract. The eastern tropical South Pacific (ETSP) represents one of the most productive areas in the ocean that is characterised by a pronounced oxygen minimum zone (OMZ). Particulate organic matter (POM) that sinks out of the euphotic zone is supplied to the anoxic sediments and utilised by microbial communities, and the degradation of POM is associated with the production and reworking of dissolved organic matter (DOM). The release of DOM to the overlying waters may, therefore, represent an important organic matter escape mechanism from remineralisation within sediments but has received little attention in OMZ regions so far. Here, we combine measurements of dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) with DOM optical properties in the form of chromophoric (CDOM) and fluorescent (FDOM) DOM from pore waters and near-bottom waters of the ETSP off Peru. We evaluate diffusion-driven fluxes and net in situ fluxes of DOC and DON to investigate processes affecting DOM cycling at the sediment–water interface along a transect at 12∘ S. To our knowledge, these are the first data for sediment release of DON and pore water CDOM and FDOM for the ETSP off Peru. Pore water DOC accumulated with increasing sediment depth, suggesting an imbalance between DOM production and remineralisation within sediments. High DON accumulation resulted in very low pore water DOC ∕ DON ratios (≤1) which could be caused by an “uncoupling” in DOC and DON remineralisation. Diffusion-driven fluxes of DOC and DON exhibited high spatial variability and ranged from 0.2±0.1 to 2.5±1.3 mmolm-2d-1 and from -0.04±0.02 to 3.3±1.7 mmolm-2d-1, respectively. Generally low net in situ DOC and DON fluxes, as well as a steepening of spectral inclination (S) of CDOM and an increase in humic-like DOM at the sediment–water interface over time, indicated active microbial DOM utilisation. The latter may potentially be stimulated by the presence of nitrate (NO3-) and nitrite (NO2-) in the water column. The microbial DOC utilisation rates, estimated in our study, are potentially sufficient to support denitrification rates of 0.2–1.4 mmolm-2d-1, suggesting that the sediment release of DOM may on occasion contribute to nitrogen loss processes in the ETSP off Peru.

scholarly journals Sediment release of dissolved organic matter to the oxygen minimum zone off Peru

2020 ◽  
Author(s):  
Alexandra N. Loginova ◽  
Andrew W. Dale ◽  
Frédéric A. C. LeMoigne ◽  
Sören Thomsen ◽  
Stefan Sommer ◽  
...  
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Pore Water ◽  
Oxygen Minimum Zone ◽  
Water Interface ◽  
Sediment Release ◽  
Bottom Waters ◽  
Minimum Zone ◽  
Oxygen Minimum

Abstract. The eastern tropical South Pacific (ETSP) represents one of the most productive areas in the ocean that is characterized by a pronounced oxygen minimum zone (OMZ). Particulate organic matter (POM) that sinks out of the euphotic zone is supplied to the anoxic sediments and utilized by microbial communities. The degradation of POM is associated with dissolved organic matter (DOM) production and reworking. The release of recalcitrant DOM to the overlying waters may represent an important organic matter escape mechanism from remineralization within sediments but received little attention in OMZ regions so far. Here, we combine measurements of dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) with DOM optical properties in the form of chromophoric (CDOM) and fluorescent (FDOM) DOM from pore waters and near-bottom waters of the ETSP off Peru. We evaluate diffusion–driven fluxes and net in situ fluxes of DOC and DON in order to investigate processes affecting DOM cycling at the sediment–water interface along a transect 12° S. To our knowledge, these are the first data for sediment release of DON and pore water CDOM and FDOM for the ETSP off Peru. Pore-water DOC and DON accumulated with increasing sediment depth, suggesting an imbalance between DOM production and remineralization within sediments. High DON accumulation resulted in very low pore water DOC / DON ratios (> 1) which could be caused by either an imbalance in DOC and DON remineralization, or to the presence of an additional nitrogen source. Diffusion driven fluxes of DOC and DON exhibited high spatial variability. They varied from 0.2–0.1 mmol m−2 d−1 to 2.52–1.3 mmol m−2 d−1 and from −0.042–0.02 mmol m−2 d−1 to 3.32–1.7 mmol m−2 d−1, respectively. Generally low net in situ DOC and DON fluxes as well as steepening of spectral slope (S) of CDOM and accumulation of humic-like FDOM at the near-bottom waters over time indicated active microbial DOM utilization at the sediment–water interface, potentially stimulated by nitrate (NO3−) and nitrite (NO2−). The microbial DOC utilization rates, estimated in our study, may be sufficient to support denitrification rates of 0.2–1.4 mmol m−2 d−1, suggesting that sediment release of DOM contributes substantially to nitrogen loss processes in the ETSP off Peru.

scholarly journals Supplementary material to "Sediment release of dissolved organic matter to the oxygen minimum zone off Peru"

2020 ◽  
Author(s):  
Alexandra N. Loginova ◽  
Andrew W. Dale ◽  
Frédéric A. C. LeMoigne ◽  
Sören Thomsen ◽  
Stefan Sommer ◽  
...  
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Oxygen Minimum Zone ◽  
Sediment Release ◽  
Minimum Zone ◽  
Supplementary Material ◽  
Oxygen Minimum

scholarly journals Sink or link? The bacterial role in benthic carbon cycling in the Arabian Sea's oxygen minimum zone

2013 ◽  
Vol 10 (11) ◽  
pp. 6879-6891 ◽  
Author(s):  
L. Pozzato ◽  
D. Van Oevelen ◽  
L. Moodley ◽  
K. Soetaert ◽  
J. J. Middelburg
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Particulate Organic Matter ◽  
Experimental Period ◽  
Oxygen Minimum Zone ◽  
Trophic Levels ◽  
Isotope Tracer ◽  
Oxygen Conditions ◽  
Minimum Zone ◽  
Oxygen Minimum

Abstract. The bacterial loop, the consumption of dissolved organic matter (DOM) by bacteria and subsequent transfer of bacterial carbon to higher trophic levels, plays a prominent role in pelagic food webs. However, its role in sedimentary ecosystems is not well documented. Here we present the results of isotope tracer experiments performed under in situ oxygen conditions in sediments from inside and outside the Arabian Sea's oxygen minimum zone (OMZ) to study the importance of the microbial loop in this setting. Particulate organic matter, added as phytodetritus, was processed by bacteria, protozoa and metazoans, while dissolved organic matter was processed only by bacteria and there was very little, if any, transfer to higher trophic levels within the 7 day experimental period. This lack of significant transfer of bacterial-derived carbon to metazoan consumers indicates that the bacterial loop is rather inefficient, in sediments both inside and outside the OMZ. Moreover, metazoans directly consumed labile particulate organic matter resources and thus competed with bacteria for phytodetritus.

scholarly journals The control of hydrogen sulfide on benthic iron and cadmium fluxes in the oxygen minimum zone off Peru

2019 ◽  
Author(s):  
Anna Plass ◽  
Christian Schlosser ◽  
Stefan Sommer ◽  
Andrew W. Dale ◽  
Eric P. Achterberg ◽  
...  
Keyword(s):  
Hydrogen Sulfide ◽  
Trace Metals ◽  
Pore Water ◽  
Oxygen Minimum Zone ◽  
Benthic Fluxes ◽  
Benthic Chamber ◽  
Bottom Waters ◽  
Minimum Zone ◽  
Oxygen Minimum

Abstract. Sediments in oxygen-depleted marine environments can be an important sink or source of bio-essential trace metals in the ocean. However, the key mechanisms controlling the release from or burial of trace metals in sediments are not exactly understood. Here, we investigate the benthic biogeochemical cycling of Fe and Cd in the oxygen minimum zone off Peru. We combine bottom water profiles, pore water profiles, as well as benthic fluxes determined from pore water profiles and in-situ from benthic chamber incubations along a depth transect at 12° S. In agreement with previous studies, both concentration-depth profiles and in-situ benthic fluxes indicate a Fe release from sediments into bottom waters. Diffusive Fe fluxes and Fe fluxes from benthic chamber incubations are roughly consistent (0.3–17.1 mmol m−2 y−1), indicating that diffusion is the main transport mechanism of dissolved Fe across the sediment-water interface. The occurrence of mats of sulfur oxidizing bacteria on the seafloor represents an important control on the spatial distribution of Fe fluxes by regulating hydrogen sulfide (H2S) concentrations and, potentially, Fe sulfide precipitation within the surface sediment. Removal of dissolved Fe after its release to anoxic bottom waters is rapid in the first 4 m away from the seafloor (half-life

scholarly journals Spectroscopic detection of a ubiquitous dissolved pigment degradation product in subsurface waters of the global ocean

2012 ◽  
Vol 9 (7) ◽  
pp. 2585-2596 ◽  
Author(s):  
R. Röttgers ◽  
B. P. Koch
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Degradation Product ◽  
Oxygen Minimum Zone ◽  
Particulate Fraction ◽  
Deep Chlorophyll Maximum ◽  
Subsurface Waters ◽  
Minimum Zone ◽  
Absorption Shoulder ◽  
Oxygen Minimum

Abstract. Measurements of light absorption by chromophoric dissolved organic matter (CDOM) from subsurface waters of the tropical Atlantic and Pacific Oceans showed a distinct absorption shoulder at 410–415 nm. This indicates an underlying absorption of a pigment whose occurrence is partly correlated with the apparent oxygen utilization (AOU) but also found in the deep chlorophyll maximum. A similar absorption maximum at ~415 nm was also found in the particulate fraction of samples taken below the surface mixing layer and is usually attributed to absorption by respiratory pigments of heterotrophic unicellular organisms. In our study, fluorescence measurements of pre-concentrated dissolved organic matter (DOM) samples from 200–6000 m confirmed a previous study suggesting that the absorption at ~415 nm was related to fluorescence at 650 nm in the oxygen minimum zone. The absorption characteristics of this fluorophore was examined by fluorescence emission/excitation analysis and showed a clear excitation maximum at 415 nm that could be linked to the absorption shoulder in the CDOM spectra. The spectral characteristics of the substance found in the dissolved and particulate fraction did not match with those of chlorophyll a degradation products (as found in a sample from the sea surface) but can be explained by the occurrence of porphyrin pigments from either heterotrophs or autotrophs. Combining the observations of the fluorescence and the 415-nm absorption shoulder suggests that there are high concentrations of a pigment degradation product in subsurface DOM of all major oceans. Most pronouncedly we found this signal in the deep chlorophyll maximum and the oxygen minimum zone of tropical regions. The origin, chemical nature, turnover rate, and fate of this molecule is so far unknown.

scholarly journals Sink or link? The bacterial role in benthic carbon cycling in the Arabian sea oxygen minimum zone

2013 ◽  
Vol 10 (6) ◽  
pp. 10399-10428 ◽  
Author(s):  
L. Pozzato ◽  
D. Van Oevelen ◽  
L. Moodley ◽  
K. Soetaert ◽  
J. J. Middelburg
Keyword(s):  
Organic Matter ◽  
Dissolved Organic Matter ◽  
Particulate Organic Matter ◽  
Arabian Sea ◽  
Experimental Period ◽  
Oxygen Minimum Zone ◽  
Trophic Levels ◽  
Isotope Tracer ◽  
Minimum Zone ◽  
Oxygen Minimum

Abstract. The bacterial loop, the consumption of dissolved organic matter (DOM) by bacteria and subsequent transfer of bacterial carbon to higher trophic levels, plays a prominent role in pelagic aquatic food webs. However, its role in sedimentary ecosystems is not well documented. Here we present the results of isotope tracer experiments performed under in situ oxygen conditions in sediments from inside and outside the Arabian Sea Oxygen Minimum Zone (OMZ) to study the importance of the microbial loop in this setting. Particulate organic matter, added as phytodetritus, was processed by bacteria, protozoa and metazoans, while dissolved organic matter was processed only by bacteria and there was very little, if any, transfer to higher trophic levels within the experimental period. This lack of significant transfer of bacterial-derived carbon to metazoan consumers indicates that the bacterial loop is rather inefficient in these sediments. Moreover, metazoans directly consume labile particulate organic matter resources and thus compete with bacteria for phytodetritus.

scholarly journals Uptake of algal carbon and the synthesis of an "essential" fatty acid by <i>Uvigerina</i> ex. gr. <i>semiornata</i> (Foraminifera) within the Pakistan margin oxygen minimum zone: evidence from fatty acid biomarker and <sup>13</sup>C tracer experiments

2014 ◽  
Vol 11 (1) ◽  
pp. 251-280
Author(s):  
K. E. Larkin ◽  
A. J. Gooday ◽  
C. Woulds ◽  
R. Jeffreys ◽  
M. Schwartz ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Organic Matter ◽  
Fatty Acid ◽  
Food Source ◽  
De Novo ◽  
Oxygen Minimum Zone ◽  
Minimum Zone ◽  
Oxygen Minimum ◽  
Tracer Experiments

Abstract. Foraminifera are an important component of benthic communities in oxygen depleted settings, where they potentially play a~significant role in the processing of organic matter. We tracked the uptake of a 13C-labeled algal food source into individual fatty acids in the benthic foraminiferal species, Uvigerina ex. gr. semiornata, from the Arabian Sea oxygen minimum zone (OMZ). The tracer experiments were conducted on the Pakistan Margin during the late/post monsoon period (August–October 2003). A monoculture of the diatom Thalassiosira weisflogii was 13C-labeled and used to simulate a pulse of phytoplankton in two complementary experiments. A lander system was used for in situ incubations at 140 m and for 2.5 days duration, whilst a laboratory incubation used an oxystat system to maintain ambient dissolved oxygen concentrations. These shipboard experiments were terminated after 5 days. Uptake of diatoms was rapid, with high incorporation of diatom fatty acids into foraminifera after ~2 days in both experiments. Ingestion of the diatom food source was indicated by the increase over time in the quantity of diatom biomarker fatty acids in the foraminifera and by the high percentage of 13C in many of the fatty acids present at the endpoint of both in~situ and laboratory-based experiments. These results indicate that U. ex. gr. semiornata rapidly ingested the diatom food source and that this foraminifera will play an important role in the short-term cycling of organic matter within this OMZ environment. The experiments also suggested that U. ex. gr. semiornata consumed non-labeled bacterial food items, particularly bacteria, and synthesised the polyunsaturated fatty acid 20:4(n-6) de novo. 20:4(n-6) is often abundant in benthic fauna yet its origins and function have remained unclear. This study demonstrates that U. ex. gr. semiornata is capable of de novo synthesis of this "essential fatty acid" and is potentially a major source of this dietary nutrient in benthic food webs.

scholarly journals The control of hydrogen sulfide on benthic iron and cadmium fluxes in the oxygen minimum zone off Peru

2020 ◽  
Vol 17 (13) ◽  
pp. 3685-3704
Author(s):  
Anna Plass ◽  
Christian Schlosser ◽  
Stefan Sommer ◽  
Andrew W. Dale ◽  
Eric P. Achterberg ◽  
...  
Keyword(s):  
Trace Metals ◽  
Trace Metal ◽  
Pore Water ◽  
Bottom Water ◽  
Oxygen Minimum Zone ◽  
Water Interface ◽  
Benthic Chamber ◽  
Minimum Zone ◽  
Cd Removal ◽  
Oxygen Minimum

Abstract. Sediments in oxygen-depleted marine environments can be an important sink or source of bio-essential trace metals in the ocean. However, the key mechanisms controlling the release from or burial of trace metals in sediments are not exactly understood. Here, we investigate the benthic biogeochemical cycling of iron (Fe) and cadmium (Cd) in the oxygen minimum zone off Peru. We combine bottom water and pore water concentrations, as well as benthic fluxes determined from pore water profiles and from in situ benthic chamber incubations, along a depth transect at 12∘ S. In agreement with previous studies, both concentration–depth profiles and in situ benthic fluxes indicate a release of Fe from sediments to the bottom water. Diffusive Fe fluxes and Fe fluxes from benthic chamber incubations (−0.3 to −17.5 mmol m−2 yr−1) are broadly consistent at stations within the oxygen minimum zone, where the flux magnitude is highest, indicating that diffusion is the main transport mechanism of dissolved Fe across the sediment–water interface. The occurrence of mats of sulfur-oxidizing bacteria on the seafloor represents an important control on the spatial distribution of Fe fluxes by regulating hydrogen sulfide (H2S) concentrations and, potentially, Fe sulfide precipitation within the surface sediment. Rapid removal of dissolved Fe after its release to anoxic bottom waters hints at oxidative removal by nitrite and interactions with particles in the near-bottom water column. Benthic flux estimates of Cd suggest a flux into the sediment within the oxygen minimum zone. Fluxes from benthic chamber incubations (up to 22.6 µmol m−2 yr−1) exceed diffusive fluxes (<1 µmol m−2 yr−1) by a factor of more than 25, indicating that downward diffusion of Cd across the sediment–water interface is of subordinate importance for Cd removal from benthic chambers. As Cd removal in benthic chambers covaries with H2S concentrations in the pore water of surface sediments, we argue that Cd removal is mediated by precipitation of cadmium sulfide (CdS) within the chamber water or directly at the sediment–water interface. A mass balance approach, taking the contributions of diffusive and chamber fluxes as well as Cd delivery with organic material into account, suggests that CdS precipitation in the near-bottom water could make an important contribution to the overall Cd mass accumulation in the sediment solid phase. According to our results, the solubility of trace metal sulfide minerals (Cd ≪ Fe) is a key factor controlling trace metal removal and, consequently, the magnitude and the temporal and spatial heterogeneity of sedimentary fluxes. We argue that, depending on their sulfide solubility, sedimentary source or sink fluxes of trace metals will change differentially as a result of declining oxygen concentrations and the associated expansion of sulfidic surface sediments. Such a trend could cause a change in the trace metal stoichiometry of upwelling water masses with potential consequences for marine ecosystems in the surface ocean.

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