Slow Protein Conformational Change, Allostery and Network Dynamics

Protein-Protein Interactions - Computational and Experimental Tools ◽

10.5772/38519 ◽

2012 ◽

Author(s):

Fan Bai ◽

Zhanghan Wu ◽

Jianshi Jin ◽

Philip Hochendoner ◽

Jianhua Xing

Keyword(s):

Conformational Change ◽

Network Dynamics ◽

Protein Conformational Change

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Coupling between ATP hydrolysis and protein conformational change in maltose transporter

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.25160 ◽

2016 ◽

Vol 85 (2) ◽

pp. 207-220

Author(s):

Xiaoying Lv ◽

Hao Liu ◽

Haifeng Chen ◽

Haipeng Gong

Keyword(s):

Conformational Change ◽

Atp Hydrolysis ◽

Protein Conformational Change ◽

Maltose Transporter

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Exploring Protein Conformational Change Using The Double Well Network Model

Biophysical Journal ◽

10.1016/j.bpj.2008.12.1634 ◽

2009 ◽

Vol 96 (3) ◽

pp. 325a

Author(s):

Marissa G. Saunders ◽

Gregory A. Voth

Keyword(s):

Conformational Change ◽

Network Model ◽

Protein Conformational Change

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Accelerated Molecular Dynamics and Protein Conformational Change: A Theoretical and Practical Guide Using a Membrane Embedded Model Neurotransmitter Transporter

Methods in Molecular Biology - Molecular Modeling of Proteins ◽

10.1007/978-1-4939-1465-4_12 ◽

2014 ◽

pp. 253-287 ◽

Author(s):

Patrick C. Gedeon ◽

James R. Thomas ◽

Jeffry D. Madura

Keyword(s):

Molecular Dynamics ◽

Conformational Change ◽

Neurotransmitter Transporter ◽

Accelerated Molecular Dynamics ◽

Practical Guide ◽

Protein Conformational Change ◽

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Increasing the Sampling Efficiency of Protein Conformational Change by Combining a Modified Replica Exchange Molecular Dynamics and Normal Mode Analysis

Journal of Chemical Theory and Computation ◽

10.1021/acs.jctc.0c00592 ◽

2020 ◽

Author(s):

Cheng Peng ◽

Jinan Wang ◽

Yulong Shi ◽

Zhijian Xu ◽

Weiliang Zhu

Keyword(s):

Molecular Dynamics ◽

Conformational Change ◽

Normal Mode ◽

Normal Mode Analysis ◽

Mode Analysis ◽

Replica Exchange ◽

Sampling Efficiency ◽

Replica Exchange Molecular Dynamics ◽

Protein Conformational Change

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Membrane protein conformational change dependent on the hydrophobic environment

Biochemistry ◽

10.1021/bi00329a018 ◽

1985 ◽

Vol 24 (8) ◽

pp. 1920-1928 ◽

Author(s):

M. Lisa Wilson ◽

Frederick W. Dahlquist

Keyword(s):

Membrane Protein ◽

Conformational Change ◽

Protein Conformational Change

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Protein adsorption on low-temperature isotropic carbon: I. Protein conformational change probed by differential scanning calorimetry

Journal of Biomedical Materials Research ◽

10.1002/jbm.820280611 ◽

1994 ◽

Vol 28 (6) ◽

pp. 735-743 ◽

Author(s):

L. Feng ◽

J. D. Andrade

Keyword(s):

Differential Scanning Calorimetry ◽

Low Temperature ◽

Protein Adsorption ◽

Conformational Change ◽

Scanning Calorimetry ◽

Protein Conformational Change ◽

Isotropic Carbon

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3P-071 Relaxation modes in protein conformational change upon ligand binding(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s138_3 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S138

Author(s):

Yusuke Naritomi ◽

Sotaro Fuchigami ◽

Mitsunori Ikeguchi ◽

Akinori Kidera

Keyword(s):

Ligand Binding ◽

Annual Meeting ◽

Conformational Change ◽

Protein Conformational Change ◽

Biophysical Society ◽

Relaxation Modes

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Coupling Nitrotyrosine Deprotonation to a Protein Conformational Change: the Case of Nitrocytochrome C

Free Radical Biology and Medicine ◽

10.1016/j.freeradbiomed.2013.10.652 ◽

2013 ◽

Vol 65 ◽

pp. S104

Author(s):

Rafael Radi ◽

Daiana Capdevila ◽

Damián Alvarez-Paggi ◽

María Ana Castro ◽

Verónica Tórtora ◽

...

Keyword(s):

Conformational Change ◽

Protein Conformational Change

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Detection of Bax protein conformational change using a surface plasmon resonance imaging-based antibody chip

Biochemical and Biophysical Research Communications ◽

10.1016/j.bbrc.2005.10.155 ◽

2005 ◽

Vol 338 (4) ◽

pp. 1834-1838 ◽

Author(s):

Moonil Kim ◽

Sun Ok Jung ◽

Kyoungsook Park ◽

Eun-Ju Jeong ◽

Hyou-Arm Joung ◽

...

Keyword(s):

Surface Plasmon Resonance ◽

Conformational Change ◽

Surface Plasmon ◽

Plasmon Resonance ◽

Surface Plasmon Resonance Imaging ◽

Resonance Imaging ◽

Bax Protein ◽

Protein Conformational Change

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Parsimony in Protein Conformational Change

Structure ◽

10.1016/j.str.2015.05.011 ◽

2015 ◽

Vol 23 (7) ◽

pp. 1190-1198 ◽

Author(s):

Brynmor K. Chapman ◽

Omar Davulcu ◽

Jack J. Skalicky ◽

Rafael P. Brüschweiler ◽

Michael S. Chapman

Keyword(s):

Conformational Change ◽

Protein Conformational Change

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