scholarly journals Nucleotide Sequence Variation and Use of Mitochondrial DNA for Phylogenetic Analyses in Anthocorid Bugs (Hemiptera: Anthocoridae)

2001 ◽  
Vol 35 (2) ◽  
pp. 85-90 ◽  
Author(s):  
Masahiko MURAJI ◽  
Kenjiro KAWASAKI ◽  
Toru SHIMIZU
2006 ◽  
Vol 28 (2) ◽  
pp. 235 ◽  
Author(s):  
M. Malekian ◽  
S. J. B. Cooper ◽  
S. M. Carthew

In South Australia the squirrel glider (Petaurus norfolcensis) was only known from one museum specimen from Bordertown collected in 1939. During a genetic study of Petaurus breviceps, using nucleotide sequence variation in mitochondrial DNA, two additional museum specimens collected near Bordertown, were identified as P. norfolcensis and recent field investigations in the area provided two additional specimens. The nearest locality for P. norfolcensis is the eastern side of the Grampians, several hundred kilometers east.


Parasitology ◽  
2008 ◽  
Vol 135 (12) ◽  
pp. 1479-1486 ◽  
Author(s):  
W. SAIJUNTHA ◽  
P. SITHITHAWORN ◽  
S. WONGKHAM ◽  
T. LAHA ◽  
N. B. CHILTON ◽  
...  

SUMMARYThe present study compared the genetic variation among 14 different geographical isolates of Opisthorchis viverrini sensu lato from Thailand and Lao PDR using sequence data for 2 mitochondrial DNA genes, the subunit 1 of NADH dehydrogenase gene (nad1) and cytochrome c oxidase gene (cox1). Four different nad1 haplotypes were detected among isolates, all of which were identical at the amino acid sequence level. Nucleotide sequence variation among 14 isolates ranged from 0 to 0·3% for nad1. Two different cox1 haplotypes were detected among isolates. These two haplotypes differed at 2 nucleotide positions, one of which resulted in a change in the amino acid sequence. Nucleotide sequence variation among isolates for cox1 ranged from 0 to 0·5%. Comparison of cox1 sequences of O. viverrini to those of other trematodes revealed nucleotide differences of 13–31%. A phylogenetic analysis of the cox1 sequence data revealed strong statistical support for a clade containing O. viverrini and 2 other species of opisthorchid trematodes; O. felineus and Clonorchis sinsensis.


Genetics ◽  
1991 ◽  
Vol 129 (1) ◽  
pp. 247-255 ◽  
Author(s):  
C M Koehler ◽  
G L Lindberg ◽  
D R Brown ◽  
D C Beitz ◽  
A E Freeman ◽  
...  

Abstract Inheritance of mitochondrial DNA (mtDNA) in Holstein cattle was characterized by pedigree analysis of nucleotide sequence variation. mtDNA was purified from leukocytes of 174 individuals representing 35 independent maternal lineages, and analyzed for nucleotide sequence variation by characterization of restriction fragment length polymorphism and direct sequence determination. These data revealed 11 maternal lineages in which leukocytes from some individuals seemingly were homoplasmic for the reference mtDNA sequence at nucleotide 364, whereas those from other individuals were homoplasmic for a sequence variant at this position. Both alternative alleles were detected in all branches of these 11 lineages, suggesting that mutation at nucleotide 364 and fixation of the variant sequence occurred frequently in independent events. Thirteen instances were detected of mother-daughter pairs in which leukocytes of each of the two animals seemingly were homoplasmic for a different allele at nucleotide 364, demonstrating the bovine mitochondrial genome can be replaced completely by a nucleotide sequence variant within a single generation. The two alternative sequences seemingly arose de novo at similar frequency, ruling out replicative advantage or other selective bias as the explanation for rapid fixation of mutations at nucleotide 364. Another instance of intralineage sequence variation was detected at nucleotide 5602. This variation was detected in only one of the lineages examined, and evidently arose within three generations.


Hereditas ◽  
2004 ◽  
Vol 119 (3) ◽  
pp. 245-252 ◽  
Author(s):  
V. L. Friesen ◽  
W. A. Montevecchi ◽  
W. S. Davidson

2009 ◽  
Vol 59 (3) ◽  
pp. 209-216 ◽  
Author(s):  
Nadia Anwar ◽  
Akira Kikuchi ◽  
Toru Kumagai ◽  
Kazuo N. Watanabe

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