Integrated Analysis of Transcriptomic Data Reveals Key Anti-CKD Targets and Anti-ESRD Targets

2020 ◽  
Vol 66 (07/2020) ◽  
Author(s):  
Zhi-Wei Sun ◽  
Ling-Lin Li ◽  
Jian-Zhong Tang ◽  
Yan-Ping Yang ◽  
Yan-Chun Geng ◽  
...  
2013 ◽  
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Yukie Sato-Kuwabara ◽  
Fabio Albuquerque Marchi ◽  
Clóvis Klock ◽  
Cristovam Scapulatempo ◽  
Felipe Coimbra ◽  
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2015 ◽  
Vol 77 ◽  
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Sara Pegolo ◽  
Barbara Di Camillo ◽  
Clara Montesissa ◽  
Francesca Tiziana Cannizzo ◽  
Bartolomeo Biolatti ◽  
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2018 ◽  
Vol 17 (4) ◽  
pp. 672-693 ◽  
Author(s):  
Valentin Voillet ◽  
Magali San Cristobal ◽  
Marie-Christine Père ◽  
Yvon Billon ◽  
Laurianne Canario ◽  
...  

2021 ◽  
Author(s):  
Xiang Zhu ◽  
Feng Li ◽  
Miqun Wang ◽  
Huibin Su ◽  
Xuedong Wu ◽  
...  

Abstract BackgroundInflammation associated chronic pain is a global clinical problem, affecting millions of people worldwide. However, the underlying mechanism of inflammation associated chronic pain remains unclear. Complete Freund's adjuvant (CFA) induced cutaneous inflammation rat has been widely used as an inflammation-induced pain hypersensitivity model.MethodsHerein, we presented a transcriptomic profile of CFA-induced rat dorsal root ganglion via an approach targeting gene expression, DNA methylation and post-transcriptional regulation.ResultsWe identified 418 differentially expressed mRNAs, 120 differentially expressed microRNAs and 2670 differentially methylated regions, which are all highly associated with multiple inflammation related pathways, including NF-κB signaling pathways and IFN signaling pathways. Integrated analysis further demonstrated that AP-1 network, which may work as a regulator of inflammation response, is sophisticatedly regulated at both transcriptomic and epigenetic level.ConclusionsWe believe our data will not only provide drug screening targets for treating chronic pain and inflammation, but also shed a light on the molecular network inflammation induced hyperalgesia.


Gene ◽  
2013 ◽  
Vol 518 (2) ◽  
pp. 273-279 ◽  
Author(s):  
Jin-Hong Kim ◽  
Ji Eun Kim ◽  
Min Hee Lee ◽  
Sun Woo Lee ◽  
Eun Ju Cho ◽  
...  

2014 ◽  
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Beatriz de Melo Maia ◽  
Iara S. Rodrigues ◽  
Fabio A. Marchi ◽  
Gabriel R. Fernandes ◽  
...  

2018 ◽  
Author(s):  
Yang-Yang Feng ◽  
Avinash Ramu ◽  
Zachary L. Skidmore ◽  
Jason Kunisaki ◽  
Kelsy C. Cotto ◽  
...  

2020 ◽  
Author(s):  
Xiang Zhu ◽  
Feng Li ◽  
Miqun Wang ◽  
Huibin Su ◽  
Xuedong Wu ◽  
...  

Abstract Inflammation associated chronic pain is a global clinical problem, affecting millions of people worldwide. However, the underlying mechanism of inflammation associated chronic pain remains unclear. Complete Freund's adjuvant (CFA) induced cutaneous inflammation rat has been widely used as an inflammation-induced pain hypersensitivity model. Herein, we presented a transcriptomic profile of CFA-induced rat dorsal root ganglion via an approach targeting gene expression, DNA methylation and post-transcriptional regulation. We identified 418 differentially expressed mRNAs, 120 differentially expressed microRNAs and 2670 differentially methylated regions, which are all highly associated with multiple inflammation related pathways, including NF-κB signaling pathways and IFN signaling pathways. Integrated analysis further demonstrated that AP-1 network, which may work as a regulator of inflammation response, is sophisticatedly regulated at both transcriptomic and epigenetic level. We believe our data will not only provide drug screening targets for treating chronic pain and inflammation, but also shed a light on the molecular network inflammation induced hyperalgesia.


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