molecular conservation
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PLoS Biology ◽  
2021 ◽  
Vol 19 (3) ◽  
pp. e3001081 ◽  
Author(s):  
Ludek Koreny ◽  
Mohammad Zeeshan ◽  
Konstantin Barylyuk ◽  
Eelco C. Tromer ◽  
Jolien J. E. van Hooff ◽  
...  

The apical complex is the instrument of invasion used by apicomplexan parasites, and the conoid is a conspicuous feature of this apparatus found throughout this phylum. The conoid, however, is believed to be heavily reduced or missing fromPlasmodiumspecies and other members of the class Aconoidasida. Relatively few conoid proteins have previously been identified, making it difficult to address how conserved this feature is throughout the phylum, and whether it is genuinely missing from some major groups. Moreover, parasites such asPlasmodiumspecies cycle through 3 invasive forms, and there is the possibility of differential presence of the conoid between these stages. We have applied spatial proteomics and high-resolution microscopy to develop a more complete molecular inventory and understanding of the organisation of conoid-associated proteins in the model apicomplexanToxoplasma gondii. These data revealed molecular conservation of all conoid substructures throughout Apicomplexa, includingPlasmodium, and even in allied Myzozoa such asChromeraand dinoflagellates. We reporter-tagged and observed the expression and location of several conoid complex proteins in the malaria modelP.bergheiand revealed equivalent structures in all of its zoite forms, as well as evidence of molecular differentiation between blood-stage merozoites and the ookinetes and sporozoites of the mosquito vector. Collectively, we show that the conoid is a conserved apicomplexan element at the heart of the invasion mechanisms of these highly successful and often devastating parasites.


Genomics ◽  
2020 ◽  
Vol 112 (5) ◽  
pp. 3226-3237 ◽  
Author(s):  
Sk. Sarif Hassan ◽  
Pabitra Pal Choudhury ◽  
Pallab Basu ◽  
Siddhartha Sankar Jana

Author(s):  
Ludek Koreny ◽  
Mohammad Zeeshan ◽  
Konstantin Barylyuk ◽  
Eelco C. Tromer ◽  
Jolien J. E. van Hooff ◽  
...  

AbstractThe apical complex is the instrument of invasion used by apicomplexan parasites, and the conoid is a conspicuous feature of this apparatus found throughout this phylum. The conoid, however, is believed to be heavily reduced or missing from Plasmodium species and other members of the class Aconoidasida. Relatively few conoid proteins have previously been identified, making it difficult to address how conserved this feature is throughout the phylum, and whether it is genuinely missing from some major groups. Moreover, parasites such as Plasmodium species cycle through three invasive forms and there is the possibility of differential presence of the conoid between these stages. We have applied spatial proteomics and high-resolution microscopy to develop a more complete molecular inventory and understanding of the organisation of conoid-associated proteins in the model apicomplexan Toxoplasma gondii. These data revealed molecular conservation of all conoid substructures throughout Apicomplexa, including Plasmodium, and even in allied Myzozoa such as Chromera and dinoflagellates. We reporter-tagged and observed the expression and location of several conoid complex proteins in the malaria model P. berghei and revealed equivalent structures in all of its zoite forms, as well as evidence of molecular differentiation between blood-stage merozoites and the ookinetes and sporozoites of the mosquito vector. Collectively we show that the conoid is a conserved apicomplexan element at the heart of the invasion mechanisms of these highly successful and often devastating parasites.


Author(s):  
Sk. Sarif Hassan ◽  
Pabitra Pal Choudhury ◽  
Pallab Basu ◽  
Siddhartha Sankar Jana

AbstractA global emergency due to the COVID-19 pandemic demands various studies related to genes and genomes of the SARS-CoV2. Among other important proteins, the role of accessory proteins are of immense importance in replication, regulation of infections of the coronavirus in the hosts. The largest accessory proteins in the SARS-CoV2 genome is ORF3a which modulates the host response to the virus infection and consequently it plays an important role in pathogenesis. In this study, an attempt is made to decipher the conservation of nucleotides, dimers, codons and amino acids in the ORF3a genes across thirty two genomes of Indian patients. ORF3a gene possesses single and double point mutations in Indian SARS-CoV2 genomes suggesting the change of SARS-CoV2’s virulence property in Indian patients. We find that the parental origin of the ORF3a gene over the genomes of SARS-CoV2 and Pangolin-CoV is same from the phylogenetic analysis based on conservations of nucleotides and so on. This study highlights the accumulation of mutation on ORF3a in Indian SARS-CoV2 genomes which may provide the designing therapeutic approach against SARS-CoV2.


eLife ◽  
2017 ◽  
Vol 6 ◽  
Author(s):  
Michael W Guernsey ◽  
Edward B Chuong ◽  
Guillaume Cornelis ◽  
Marilyn B Renfree ◽  
Julie C Baker

Eutherians are often mistakenly termed ‘placental mammals’, but marsupials also have a placenta to mediate early embryonic development. Lactation is necessary for both infant and fetal development in eutherians and marsupials, although marsupials have a far more complex milk repertoire that facilitates morphogenesis of developmentally immature young. In this study, we demonstrate that the anatomically simple tammar placenta expresses a dynamic molecular program that is reminiscent of eutherian placentation, including both fetal and maternal signals. Further, we provide evidence that genes facilitating fetal development and nutrient transport display convergent co-option by placental and mammary gland cell types to optimize offspring success.


2017 ◽  
Author(s):  
Michael W Guernsey ◽  
Edward B Chuong ◽  
Guillaume Cornelis ◽  
Marilyn B Renfree ◽  
Julie C Baker

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