scholarly journals Development of near‐infrared firefly luciferin analogue reacted with wild‐type and mutant luciferases

Chirality ◽  
2020 ◽  
Vol 32 (7) ◽  
pp. 922-931 ◽  
Author(s):  
Nobuo Kitada ◽  
Ryohei Saito ◽  
Rika Obata ◽  
Satoshi Iwano ◽  
Kazuma Karube ◽  
...  
2015 ◽  
Vol 127 (6) ◽  
pp. 1718-1718
Author(s):  
Amit P. Jathoul ◽  
Helen Grounds ◽  
James C. Anderson ◽  
Martin A. Pule

2021 ◽  
Author(s):  
Jared Weaver ◽  
Chi-Yun Lin ◽  
Kaitlyn M. Faries ◽  
Irimpan Mathews ◽  
Silvia Russi ◽  
...  

Photosynthetic reaction centers (RCs) from Rhodobacter sphaeroides were engineered to vary the electronic properties of a key tyrosine close to an essential electron transfer component (M210) via its replacement with site-specific genetically encoded noncanonical amino acid tyrosine analogs. High fidelity of noncanonical amino acid incorporation was verified with mass spectrometry and x-ray crystallography and demonstrated that RC variants exhibit no significant structural alterations relative to wild-type. Ultrafast transient absorption spectroscopy indicates the excited primary electron donor, P*, decays via an approximately 4 ps and 20 ps population to produce the charge-separated state P+HA- in all variants. Global analysis indicates that in the 4 ps population P+HA- forms through a 2-step process P* –> P+BA– –> P+HA-, while in the 20 ps population it forms via a 1-step P* –> P+HA– superexchange mechanism. The percentage of P* population that decays via the superexchange route varies from approximately 25% to 45% among variants while in wild-type this percentage is approximately 15%. Increases in the P* population which decays via superexchange correlates with increases in free energy of the P+BA– intermediate caused by a given M210 tyrosine analog. This was experimentally estimated through resonance Stark spectroscopy, redox titrations, and near-infrared absorption measurements. As the most energetically perturbative variant, 3-nitrotyrosine at M210 creates an approximately 110 meV increase in the free energy of P+BA– along with a dramatic diminution of the 1030 nm transient absorption band indicative of P+BA– formation. Collectively this work indicates the tyrosine at M210 tunes the mechanism of primary electron transfer in the RC.<br>


2014 ◽  
Vol 126 (48) ◽  
pp. 13275-13279 ◽  
Author(s):  
Amit P. Jathoul ◽  
Helen Grounds ◽  
James C. Anderson ◽  
Martin A. Pule

2018 ◽  
Vol 59 (12) ◽  
pp. 1087-1090 ◽  
Author(s):  
Nobuo Kitada ◽  
Tsuyoshi Saitoh ◽  
Yuma Ikeda ◽  
Satoshi Iwano ◽  
Rika Obata ◽  
...  

Tetrahedron ◽  
2013 ◽  
Vol 69 (46) ◽  
pp. 9726-9734 ◽  
Author(s):  
Chihiro Miura ◽  
Masahiro Kiyama ◽  
Satoshi Iwano ◽  
Kazuto Ito ◽  
Rika Obata ◽  
...  

2020 ◽  
Vol 22 (1) ◽  
pp. 303
Author(s):  
Vadim R. Viviani ◽  
Vanessa R. Bevilaqua ◽  
Daniel R. de Souza ◽  
Gabriel F. Pelentir ◽  
Michio Kakiuchi ◽  
...  

Beetle luciferases produce bioluminescence (BL) colors ranging from green to red, having been extensively used for many bioanalytical purposes, including bioimaging of pathogen infections and metastasis proliferation in living animal models and cell culture. For bioimaging purposes in mammalian tissues, red bioluminescence is preferred, due to the lower self-absorption of light at longer wavelengths by hemoglobin, myoglobin and melanin. Red bioluminescence is naturally produced only by Phrixothrix hirtus railroad worm luciferase (PxRE), and by some engineered beetle luciferases. However, Far-Red (FR) and Near-Infrared (NIR) bioluminescence is best suited for bioimaging in mammalian tissues due to its higher penetrability. Although some FR and NIR emitting luciferin analogs have been already developed, they usually emit much lower bioluminescence activity when compared to the original luciferin-luciferases. Using site-directed mutagenesis of PxRE luciferase in combination with 6′-modified amino-luciferin analogs, we finally selected novel FR combinations displaying BL ranging from 636–655 nm. Among them, the combination of PxRE-R215K mutant with 6′-(1-pyrrolidinyl)luciferin proved to be the best combination, displaying the highest BL activity with a catalytic efficiency ~2.5 times higher than the combination with native firefly luciferin, producing the second most FR-shifted bioluminescence (650 nm), being several orders of magnitude brighter than commercial AkaLumine with firefly luciferase. Such combination also showed higher thermostability, slower BL decay time and better penetrability across bacterial cell membranes, resulting in ~3 times higher in vivo BL activity in bacterial cells than with firefly luciferin. Overall, this is the brightest FR emitting combination ever reported, and is very promising for bioimaging purposes in mammalian tissues.


2014 ◽  
Vol 53 (48) ◽  
pp. 13059-13063 ◽  
Author(s):  
Amit P. Jathoul ◽  
Helen Grounds ◽  
James C. Anderson ◽  
Martin A. Pule

Tetrahedron ◽  
2013 ◽  
Vol 69 (19) ◽  
pp. 3847-3856 ◽  
Author(s):  
Satoshi Iwano ◽  
Rika Obata ◽  
Chihiro Miura ◽  
Masahiro Kiyama ◽  
Kazutoshi Hama ◽  
...  

2021 ◽  
Author(s):  
Jared Weaver ◽  
Chi-Yun Lin ◽  
Kaitlyn M. Faries ◽  
Irimpan Mathews ◽  
Silvia Russi ◽  
...  

Photosynthetic reaction centers (RCs) from Rhodobacter sphaeroides were engineered to vary the electronic properties of a key tyrosine close to an essential electron transfer component (M210) via its replacement with site-specific genetically encoded noncanonical amino acid tyrosine analogs. High fidelity of noncanonical amino acid incorporation was verified with mass spectrometry and x-ray crystallography and demonstrated that RC variants exhibit no significant structural alterations relative to wild-type. Ultrafast transient absorption spectroscopy indicates the excited primary electron donor, P*, decays via an approximately 4 ps and 20 ps population to produce the charge-separated state P+HA- in all variants. Global analysis indicates that in the 4 ps population P+HA- forms through a 2-step process P* –> P+BA– –> P+HA-, while in the 20 ps population it forms via a 1-step P* –> P+HA– superexchange mechanism. The percentage of P* population that decays via the superexchange route varies from approximately 25% to 45% among variants while in wild-type this percentage is approximately 15%. Increases in the P* population which decays via superexchange correlates with increases in free energy of the P+BA– intermediate caused by a given M210 tyrosine analog. This was experimentally estimated through resonance Stark spectroscopy, redox titrations, and near-infrared absorption measurements. As the most energetically perturbative variant, 3-nitrotyrosine at M210 creates an approximately 110 meV increase in the free energy of P+BA– along with a dramatic diminution of the 1030 nm transient absorption band indicative of P+BA– formation. Collectively this work indicates the tyrosine at M210 tunes the mechanism of primary electron transfer in the RC.<br>


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