Molecular detection and phylogenetic analysis of human parechovirus in individuals with acute diarrhea and healthy controls in Guangzhou, China

2018 ◽  
Vol 90 (9) ◽  
pp. 1444-1452 ◽  
Author(s):  
Xuejiao Chen ◽  
Tingli Shi ◽  
Jianhua Huang ◽  
Gang Xiao ◽  
Jing Huang ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Acute Diarrhea ◽  
Molecular Detection ◽  
Healthy Controls ◽  
Human Parechovirus

Molecular detection and phylogenetic analysis of human parechovirus in children with acute gastroenteritis in Iran

2020 ◽  
Author(s):  
Mehrdad Mohammadi ◽  
Shahnaz Armin ◽  
Ahmad Piroozmand
Keyword(s):  
Phylogenetic Analysis ◽  
Acute Gastroenteritis ◽  
Molecular Detection ◽  
Viral Gastroenteritis ◽  
Vp1 Gene ◽  
Human Parechovirus ◽  
Reverse Transcription Pcr ◽  
Stool Specimens ◽  
Acute Viral Gastroenteritis ◽  
Sensitive Group

Aim: Human parechovirus (HPeV) is one of the major causes of acute gastroenteritis in children. Materials & methods: Stool specimens (n = 250) were collected from children aged ≤3 years during 2018–2019. HPeV RNA was detected by reverse transcription-PCR and genotyping by VP1 gene, Rotavirus (RV) screened by ELISA. Results: HPeV was detected in 12% of the cases. The children under 6-months old (64.2%) were a sensitive group and HPeV was more prevalent during January–February (73.3%). The co-infection of HPeV with RV was 50%. All of the sequenced samples belong to the HPeV-1 genotype. Conclusion: HPeV-1 is one of the major causes of acute viral gastroenteritis in children and the co-infection of RV can be an additional infection in some cases.

scholarly journals Molecular Detection of Novel Borrelia Species, Candidatus Borrelia javanense, in Amblyomma javanense Ticks from Pangolins

Pathogens ◽  
2021 ◽  
Vol 10 (6) ◽  
pp. 728
Author(s):  
Bao-Gui Jiang ◽  
Ai-Qiong Wu ◽  
Jia-Fu Jiang ◽  
Ting-Ting Yuan ◽  
Qiang Xu ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Detection ◽  
Southern China ◽  
Natural Circulation ◽  
Rrna Gene ◽  
The Novel ◽  
Flagellin Gene ◽  
Manis Javanica ◽  
The 16S Rrna Gene ◽  
Novel Agent

A novel Borrelia species, Candidatus Borrelia javanense, was found in ectoparasite ticks, Amblyomma javanense, from Manis javanica pangolins seized in anti-smuggling operations in southern China. Overall, 12 tick samples in 227 (overall prevalence 5.3%) were positive for Candidatus B. javanense, 9 (5.1%) in 176 males, and 3 (5.9%) in 51 females. The phylogenetic analysis, based on the 16S rRNA gene and the flagellin gene sequences of the Borrelia sp., exhibited strong evidence that Candidatus B. javanense did not belong to the Lyme disease Borrelia group and the relapsing fever Borrelia group but another lineage of Borrelia. The discovery of the novel Borrelia species suggests that A. javanense may be the transmit vector, and the M. javanica pangolins should be considered a possible origin reservoir in the natural circulation of these new pathogens. To our knowledge, this is the first identification of a novel Borrelia species agent in A. javanense from pangolins. Whether the novel agent is pathogenic to humans is unknown and needs further research.

Molecular detection and phylogenetic analysis of Ehrlichia canis in a Philippine dog

2018 ◽  
Vol 9 (2) ◽  
pp. 266-269 ◽  
Author(s):  
Naoya Maekawa ◽  
Satoru Konnai ◽  
Michelle M. Balbin ◽  
Claro N. Mingala ◽  
Karlo R.B. Gicana ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Detection ◽  
Ehrlichia Canis

scholarly journals Molecular detection and phylogenetic analysis of tick-borne pathogens in wild Korean water deer and farmed elk in Gyeongbuk and Gangwon Provinces of Korea

2018 ◽  
Vol 80 (9) ◽  
pp. 1473-1478 ◽  
Author(s):  
Minkyo LEE ◽  
Min-Goo SEO ◽  
Seung-Hun LEE ◽  
In-Ohk OUH ◽  
Young-Hoan KIM ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Detection ◽  
Korean Water Deer

Molecular detection and phylogenetic analysis of megalocytivirus in Brazilian ornamental fish

2018 ◽  
Vol 163 (8) ◽  
pp. 2225-2231 ◽  
Author(s):  
Samara Rita de Lucca Maganha ◽  
Pedro Henrique Magalhães Cardoso ◽  
Simone de Carvalho Balian ◽  
Sabrina Ribeiro de Almeida-Queiroz ◽  
Andrezza Maria Fernandes ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Molecular Detection ◽  
Ornamental Fish
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