scholarly journals Two Step Ant Colony System to Solve the Feature Selection Problem

Author(s):  
Rafael Bello ◽  
Amilkar Puris ◽  
Ann Nowe ◽  
Yailen Martínez ◽  
María M. García
2015 ◽  
Vol 26 (7) ◽  
pp. 1693-1708 ◽  
Author(s):  
Gang Wang ◽  
HaiCheng Eric Chu ◽  
Yuxuan Zhang ◽  
Huiling Chen ◽  
Weitong Hu ◽  
...  

2021 ◽  
Vol 7 ◽  
pp. 293-303
Author(s):  
Yang Wang ◽  
Xinxiong Jiang ◽  
Faqi Yan ◽  
Yu Cai ◽  
Siyang Liao

Author(s):  
A. M. Bagirov ◽  
A. M. Rubinov ◽  
J. Yearwood

The feature selection problem involves the selection of a subset of features that will be sufficient for the determination of structures or clusters in a given dataset and in making predictions. This chapter presents an algorithm for feature selection, which is based on the methods of optimization. To verify the effectiveness of the proposed algorithm we applied it to a number of publicly available real-world databases. The results of numerical experiments are presented and discussed. These results demonstrate that the algorithm performs well on the datasets considered.


2020 ◽  
Vol 21 (21) ◽  
pp. 7891
Author(s):  
Chi-Wei Chen ◽  
Lan-Ying Huang ◽  
Chia-Feng Liao ◽  
Kai-Po Chang ◽  
Yen-Wei Chu

Protein phosphorylation is one of the most important post-translational modifications, and many biological processes are related to phosphorylation, such as DNA repair, transcriptional regulation and signal transduction and, therefore, abnormal regulation of phosphorylation usually causes diseases. If we can accurately predict human phosphorylation sites, this could help to solve human diseases. Therefore, we developed a kinase-specific phosphorylation prediction system, GasPhos, and proposed a new feature selection approach, called Gas, based on the ant colony system and a genetic algorithm and used performance evaluation strategies focused on different kinases to choose the best learning model. Gas uses the mean decrease Gini index (MDGI) as a heuristic value for path selection and adopts binary transformation strategies and new state transition rules. GasPhos can predict phosphorylation sites for six kinases and showed better performance than other phosphorylation prediction tools. The disease-related phosphorylated proteins that were predicted with GasPhos are also discussed. Finally, Gas can be applied to other issues that require feature selection, which could help to improve prediction performance.


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