Cognition Network Technology: Object Orientation and Fractal Topology in Biomedical Image Analysis. Method and Applications

Author(s):  
Martin Baatz ◽  
Arno Schäpe ◽  
Günter Schmidt ◽  
Maria Athelogou ◽  
Gerd Binnig
MethodsX ◽  
2021 ◽  
pp. 101447
Author(s):  
Fabio Valoppi ◽  
Petri Lassila ◽  
Ari Salmi ◽  
Edward Haeggström

2003 ◽  
Vol 25 (1) ◽  
pp. 1-36 ◽  
Author(s):  
Karsten Rodenacker ◽  
Ewert Bengtsson

Feature extraction is a crucial step in most cytometry studies. In this paper a systematic approach to feature extraction is presented. The feature sets that have been developed and used for quantitative cytology at the Laboratory for Biomedical Image Analysis of the GSF as well as at the Center for Image Analysis in Uppsala over the last 25 years are described and illustrated. The feature sets described are divided into morphometric, densitometric, textural and structural features. The latter group is used to describe the eu‐ and hetero‐chromatin in a way complementing the textural methods. The main goal of the paper is to bring attention to the need of a common and well defined description of features used in cyto‐ and histometrical studies. The application of the sets of features is shown in an overview of projects from different fields. Finally some rules of thumb for the design of studies in this field are proposed. Colour figures can be viewed onhttp://www.esacp.org/acp/2003/25‐1/rodenacker.htm.


1989 ◽  
Vol 93 (3) ◽  
pp. 358-362 ◽  
Author(s):  
Thomas J. Flotte ◽  
Johanna M. Seddon ◽  
Yuqing Zhang ◽  
Robert J. Glynn ◽  
Kathleen M. Egan ◽  
...  

2010 ◽  
Vol 13 (04) ◽  
pp. 197-201 ◽  
Author(s):  
Lior Shamir ◽  
David T. Felson ◽  
Luigi Ferrucci ◽  
Ilya G. Goldberg

The detection of knee osteoarthritis (OA) is a subjective task, and even two highly experienced and well-trained readers might not always agree on a specific case. This problem is noticeable in OA population studies, in which different scoring projects provide significantly different scores for the same knee X-rays. Here we propose a method for quantitative assessment and comparison of knee X-ray scoring projects in OA population studies. The method works by applying an image analysis method that automatically detects OA in knee X-ray images, and comparing the consistency of the scores when using each of the scoring projects as "gold standard." The method was applied to compare the osteoarthritis initiative (OAI) clinic reading derived Kellgren and Lawrence (K&L) scores to central reading, and showed that when using the derived K&L scores the automatic image analysis method was able to accurately differentiate between healthy joints and moderate OA joints in ~70% of the cases. When the OAI central reading scores were used as gold standard, the detection accuracy was elevated to ~77%. These results show that the OAI central readings scores are more consistent with the X-rays, indicating that the central reading better reflects the radiographic features associated with OA, compared to the OAI K&L scores derived from clinic readings.


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