Log-Map Analysis

2002 ◽  
pp. 41-51 ◽  
Author(s):  
Luca Lombardi ◽  
Marco Porta
Keyword(s):  
2008 ◽  
Vol 34 (12) ◽  
pp. 757-764 ◽  
Author(s):  
Paolo Gamba ◽  
Luca Lombardi ◽  
Marco Porta
Keyword(s):  

2017 ◽  
Author(s):  
Natalia Sizochenko ◽  
Alicja Mikolajczyk ◽  
Karolina Jagiello ◽  
Tomasz Puzyn ◽  
Jerzy Leszczynski ◽  
...  

Application of predictive modeling approaches is able solve the problem of the missing data. There are a lot of studies that investigate the effects of missing values on qualitative or quantitative modeling, but only few publications have been<br>discussing it in case of applications to nanotechnology related data. Current project aimed at the development of multi-nano-read-across modeling technique that helps in predicting the toxicity of different species: bacteria, algae, protozoa, and mammalian cell lines. In this study, the experimental toxicity for 184 metal- and silica oxides (30 unique chemical types) nanoparticles from 15 experimental datasets was analyzed. A hybrid quantitative multi-nano-read-across approach that combines interspecies correlation analysis and self-organizing map analysis was developed. At the first step, hidden patterns of toxicity among the nanoparticles were identified using a combination of methods. Then the developed model that based on categorization of metal oxide nanoparticles’ toxicity outcomes was evaluated by means of combination of supervised and unsupervised machine learning techniques to find underlying factors responsible for toxicity.


2017 ◽  
Author(s):  
Natalia Sizochenko ◽  
Alicja Mikolajczyk ◽  
Karolina Jagiello ◽  
Tomasz Puzyn ◽  
Jerzy Leszczynski ◽  
...  

Application of predictive modeling approaches is able solve the problem of the missing data. There are a lot of studies that investigate the effects of missing values on qualitative or quantitative modeling, but only few publications have been<br>discussing it in case of applications to nanotechnology related data. Current project aimed at the development of multi-nano-read-across modeling technique that helps in predicting the toxicity of different species: bacteria, algae, protozoa, and mammalian cell lines. In this study, the experimental toxicity for 184 metal- and silica oxides (30 unique chemical types) nanoparticles from 15 experimental datasets was analyzed. A hybrid quantitative multi-nano-read-across approach that combines interspecies correlation analysis and self-organizing map analysis was developed. At the first step, hidden patterns of toxicity among the nanoparticles were identified using a combination of methods. Then the developed model that based on categorization of metal oxide nanoparticles’ toxicity outcomes was evaluated by means of combination of supervised and unsupervised machine learning techniques to find underlying factors responsible for toxicity.


2021 ◽  
pp. 1-22
Author(s):  
Jaume Binimelis Sebastián ◽  
Antoni Ordinas Garau ◽  
Maurici Ruiz Pérez

Cancers ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 1291
Author(s):  
Seda Camalan ◽  
Hanya Mahmood ◽  
Hamidullah Binol ◽  
Anna Luiza Damaceno Araújo ◽  
Alan Roger Santos-Silva ◽  
...  

Oral cancer/oral squamous cell carcinoma is among the top ten most common cancers globally, with over 500,000 new cases and 350,000 associated deaths every year worldwide. There is a critical need for objective, novel technologies that facilitate early, accurate diagnosis. For this purpose, we have developed a method to classify images as “suspicious” and “normal” by performing transfer learning on Inception-ResNet-V2 and generated automated heat maps to highlight the region of the images most likely to be involved in decision making. We have tested the developed method’s feasibility on two independent datasets of clinical photographic images of 30 and 24 patients from the UK and Brazil, respectively. Both 10-fold cross-validation and leave-one-patient-out validation methods were performed to test the system, achieving accuracies of 73.6% (±19%) and 90.9% (±12%), F1-scores of 97.9% and 87.2%, and precision values of 95.4% and 99.3% at recall values of 100.0% and 81.1% on these two respective cohorts. This study presents several novel findings and approaches, namely the development and validation of our methods on two datasets collected in different countries showing that using patches instead of the whole lesion image leads to better performance and analyzing which regions of the images are predictive of the classes using class activation map analysis.


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