scholarly journals Feature Selection Filters Based on the Permutation Test

2004 ◽  
pp. 334-346 ◽  
Author(s):  
Predrag Radivojac ◽  
Zoran Obradovic ◽  
A. Keith Dunker ◽  
Slobodan Vucetic
Keyword(s):  
Feature Selection ◽  
Permutation Test

scholarly journals PhD7Faster 2.0: predicting clones propagating faster from the Ph.D.-7 phage display library by coupling PseAAC and tripeptide composition

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e7131 ◽  
Author(s):  
Bifang He ◽  
Heng Chen ◽  
Jian Huang
Keyword(s):  
Feature Selection ◽  
Phage Display ◽  
Large Scale ◽  
Permutation Test ◽  
Feature Selection Method ◽  
Phage Display Library ◽  
Support Vector ◽  
Affinity Ligands ◽  
Phage Display Libraries ◽  
Fold Cross Validation

Selection from phage display libraries empowers isolation of high-affinity ligands for various targets. However, this method also identifies propagation-related target-unrelated peptides (PrTUPs). These false positive hits appear because of their amplification advantages. In this report, we present PhD7Faster 2.0 for predicting fast-propagating clones from the Ph.D.-7 phage display library, which was developed based on the support vector machine. Feature selection was performed against PseAAC and tripeptide composition using the incremental feature selection method. Ten-fold cross-validation results show that PhD7Faster 2.0 succeeds a decent performance with the accuracy of 81.84%, the Matthews correlation coefficient of 0.64 and the area under the ROC curve of 0.90. The permutation test with 1,000 shuffles resulted in p < 0.001. We implemented PhD7Faster 2.0 into a publicly accessible web tool (http://i.uestc.edu.cn/sarotup3/cgi-bin/PhD7Faster.pl) and constructed standalone graphical user interface and command-line versions for different systems. The standalone PhD7Faster 2.0 is able to detect PrTUPs within small datasets as well as large-scale datasets. This makes PhD7Faster 2.0 an enhanced and powerful tool for scanning and reporting faster-growing clones from the Ph.D.-7 phage display library.

Feature Selection Strategies and Perceptual Expertise in Configuration Search Tasks

2011 ◽  
Author(s):  
Lindsey M. Kitchell ◽  
Francisco J. Parada ◽  
Brandi L. Emerick ◽  
Tom A. Busey
Keyword(s):  
Feature Selection ◽  
Perceptual Expertise ◽  
Search Tasks ◽  
Selection Strategies

BLIND FEATURE SELECTION AND EXTRACTION IN A 3D IMAGE CUBE

2012 ◽  
Vol 19 (2) ◽  
pp. 97-111 ◽  
Author(s):  
Muhammad Ahmad ◽  
Syungyoung Lee ◽  
Ihsan Ul Haq ◽  
Qaisar Mushtaq
Keyword(s):  
Feature Selection ◽  
3D Image ◽  
Image Cube

An Enhancement of Feature Selection Algorithm for EDM: A Review

2018 ◽  
Vol 8 (5) ◽  
pp. 29
Author(s):  
Manpreet Kaur ◽  
Chamkaur Singh
Keyword(s):  
Feature Selection ◽  
Educational Data Mining ◽  
Problem Formulation ◽  
Research Area ◽  
Education Quality ◽  
Educational Institutions ◽  
Selection Algorithm ◽  
Positive Role ◽  
Data Set ◽  
Selection Algorithms

Educational Data Mining (EDM) is an emerging research area help the educational institutions to improve the performance of their students. Feature Selection (FS) algorithms remove irrelevant data from the educational dataset and hence increases the performance of classifiers used in EDM techniques. This paper present an analysis of the performance of feature selection algorithms on student data set. .In this papers the different problems that are defined in problem formulation. All these problems are resolved in future. Furthermore the paper is an attempt of playing a positive role in the improvement of education quality, as well as guides new researchers in making academic intervention.

Feature selection of the armature winding broken coils in synchronous motor using genetic algorithm and mahalanobis distance

2012 ◽  
Vol 57 (3) ◽  
pp. 829-835 ◽  
Author(s):  
Z. Głowacz ◽  
J. Kozik
Keyword(s):  
Genetic Algorithm ◽  
Feature Selection ◽  
Mahalanobis Distance ◽  
Distance Measure ◽  
Synchronous Motor ◽  
Medical Diagnostics ◽  
Motor Current ◽  
Feature Spaces ◽  
Multidimensional Feature Spaces ◽  
Selection Of

The paper describes a procedure for automatic selection of symptoms accompanying the break in the synchronous motor armature winding coils. This procedure, called the feature selection, leads to choosing from a full set of features describing the problem, such a subset that would allow the best distinguishing between healthy and damaged states. As the features the spectra components amplitudes of the motor current signals were used. The full spectra of current signals are considered as the multidimensional feature spaces and their subspaces are tested. Particular subspaces are chosen with the aid of genetic algorithm and their goodness is tested using Mahalanobis distance measure. The algorithm searches for such a subspaces for which this distance is the greatest. The algorithm is very efficient and, as it was confirmed by research, leads to good results. The proposed technique is successfully applied in many other fields of science and technology, including medical diagnostics.

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