Gene knockout and knockin by zinc-finger nucleases: current status and perspectives

2012 ◽  
Vol 70 (16) ◽  
pp. 2969-2983 ◽  
Author(s):  
J. Hauschild-Quintern ◽  
B. Petersen ◽  
G. J. Cost ◽  
H. Niemann
2013 ◽  
Vol 35 (6) ◽  
pp. 778-785
Author(s):  
Sui-Zhong CAO ◽  
Cheng-He YUE ◽  
Xi-Rui LI ◽  
Chong FENG ◽  
Chuan LONG ◽  
...  

2018 ◽  
Vol 8 (1) ◽  
Author(s):  
Zhaolin Sun ◽  
Ming Wang ◽  
Shiwen Han ◽  
Shuangyu Ma ◽  
Zhiyuan Zou ◽  
...  

2013 ◽  
Vol 24 (6) ◽  
pp. 399-411 ◽  
Author(s):  
Laetitia P.L. Pelascini ◽  
Ignazio Maggio ◽  
Jin Liu ◽  
Maarten Holkers ◽  
Toni Cathomen ◽  
...  

PLoS ONE ◽  
2011 ◽  
Vol 6 (12) ◽  
pp. e28911 ◽  
Author(s):  
Anna Osiak ◽  
Frank Radecke ◽  
Eva Guhl ◽  
Sarah Radecke ◽  
Nadine Dannemann ◽  
...  

2013 ◽  
Vol 25 (1) ◽  
pp. 314
Author(s):  
W. Fujii ◽  
K. Kano ◽  
K. Sugiura ◽  
K. Naito

Zinc finger nucleases (ZFN), which are artificial restriction enzymes consisting of an engineered zinc-finger domain (ZF) and an endonuclease domain, can be used for the induction of site-directed mutation and the efficient generation of gene knockout animals. However, the repeated construction of various ZFN sequences is both expensive and time consuming. In this study, we attempted to establish a novel method for inexpensive and rapid ZFN construction. First, we constructed ZFN against mouse Rosa26 and original mouse Gli3 gene loci using short PCR primer sets (>30 bp), which contained 21 bp of the ZF recognition helix for a specific DNA triplet. We prepared 18 sets of such primers and PCR was performed using one of these primer sets and the partial ZF sequence as a template, which was obtained from the first to second DNA recognition helix of mouse Zif268. The PCR products were joined by overlap-PCR and nested PCR, and then inserted into a vector coding the endonuclease domain of FokI nuclease. By these steps, we successfully synthesised intended ZFN vectors containing 4 to 6 fingers. Next, we evaluated the functions of constructed ZFN. The mRNA of constructed ZFN were transcribed in vitro and injected into the cytoplasm of C57BL/6N zygotes. After 24 h of culture, 2-cell stage embryos were subjected to genomic PCR of the target locus, and the PCR products were directly sequenced. When ZFN mRNA for mouse Rosa26 was injected, 3- to 146-bp deletions were detected in 92.8% of injected embryos. This result was almost the same as previously reported for ZFN, indicating that our novel construction method can synthesise functional ZFN, which work as a site-directed nuclease, and that efficiency was comparable with those constructed by conventional PCR methods using long oligonucleotide sets (60 bp).


2010 ◽  
pp. n/a-n/a ◽  
Author(s):  
Pei-Qi Liu ◽  
Edmond M. Chan ◽  
Gregory J. Cost ◽  
Lin Zhang ◽  
Jianbin Wang ◽  
...  

2011 ◽  
Vol 23 (1) ◽  
pp. 260 ◽  
Author(s):  
J. Hauschild ◽  
A. L. Queisser ◽  
J. W. Carnwath ◽  
G. Cost ◽  
Y. Santiago ◽  
...  

Hyperacute rejection after porcine-to-human xenotransplantation is caused by binding of preformed human antibodies against Gal-epitopes on the surface of porcine cells. Organs from Gal-negative pigs have shown prolonged survival after transplantation into baboons. Knocking out a gene by conventional gene targeting frequency is extremely inefficient (homologous recombination = 0.0001 to 0.001%; Denning et al. 2001). Recent publications in rats (Geurts et al. 2009) show that the gene knockout via zinc finger nuclease (ZFN)-driven nonhomologous end joining (NHEJ) can be enhanced 10 000-fold over conventional approaches, making it feasible to generate a biallelic gene knockout with one ZFN application. Here, we used ZFN technology to generate porcine cells that carry a ZFN-mediated knockout of the Gal gene to use these cells as donor cells in somatic cell nuclear transfer (SCNT) to obtain live offspring. One primary porcine fetal fibroblast cell line was transfected by electroporation (n = 6) with a pair of ZFN plasmids designed to target the DNA sequence encoding the catalytic domain located in exon 9 of the α1,3-gal locus. Transfected cells were incubated (7 days at a combination of 30°C and 37°C) and analysed for Gal expression by fluorescence activated cell sorting (FACS) using fluorescein isothiocyanate (FITC)-conjugated isolectin-B4. On average, 1.4% (± 0.3%; n = 6) of the cells were free of Gal epitopes, indicating a biallelic knockout. DNA mutation detection analysis (Cel-I assay) of cell cultures gave a mean frequency of 3.5% NHEJ (± 1.3%; n = 6) giving the fraction of mutant alleles within the cell population. One cell line with 1% Gal-negative cells was sorted by a magnetic Dynabead-based separation method to select for Gal-negative cells (Fujimura et al. 2008). Because of the limited amount of Gal-negative cells within the cell population, we chose to select the cells with magnetic beads. This method is gentler to the cells and leads to a higher plating efficiency after sorting compared with FACS. The sorted cells could be easily expanded and will serve as donor cells in SCNT to show the feasibility of generating knockout pigs via ZFN-mediated gene knockout. This study demonstrates that ZFN technology is an applicable tool to produce genetically modified porcine cells for use as donors in SCNT and to speed the creation of pig models for xenotransplantation and human diseases.


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