Croceicoccus gelatinilyticus sp. nov., isolated from a tidal flat sediment

2021 ◽  
Vol 204 (1) ◽  
Author(s):  
Tao Pei ◽  
Yang Liu ◽  
Juan Du ◽  
Kunpeng Huang ◽  
Ming-Rong Deng ◽  
...  
2018 ◽  
Vol 68 (4) ◽  
pp. 1350-1355 ◽  
Author(s):  
Sooyeon Park ◽  
Jeehyun Choi ◽  
Sung-Min Won ◽  
Ji-Min Park ◽  
Jung-Hoon Yoon

2005 ◽  
Vol 55 (6) ◽  
pp. 2519-2523 ◽  
Author(s):  
Yoon-Dong Park ◽  
Keun Sik Baik ◽  
Hana Yi ◽  
Kyung Sook Bae ◽  
Jongsik Chun

A Gram-negative, motile, strictly aerobic, violet-pigment-producing bacterium, designated strain FR1199T, was isolated from tidal flat sediment of Byunsan, South Korea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain FR1199T represents a distinct line of descent within the genus Pseudoalteromonas. The phenotypic features of strain FR1199T were similar to those of Pseudoalteromonas phenolica and Pseudoalteromonas luteoviolacea, but several physiological and chemotaxonomical properties readily distinguished strain FR1199T from these species. Major fatty acids were straight-chain saturated (C16 : 0) and monounsaturated C18 : 1 ω7c fatty acids. The DNA G+C content was 39 mol%. On the basis of polyphasic evidence, it is concluded that the isolate represents a novel species within the genus Pseudoalteromonas, for which the name Pseudoalteromonas byunsanensis sp. nov. is proposed. The type strain is FR1199T (=JCM 12483T=KCTC 12274T).


2007 ◽  
Vol 50 (6) ◽  
pp. 812-820 ◽  
Author(s):  
DongQi Wang ◽  
ZhenLou Chen ◽  
ShiYuan Xu ◽  
LiangJun Da ◽  
ChunJuan Bi ◽  
...  

Author(s):  
Yang Liu ◽  
Tao Pei ◽  
Juan Du ◽  
Meijie Chao ◽  
Ming-Rong Deng ◽  
...  

A novel Gram-stain-negative, facultatively anaerobic, rod-shaped and non-motile bacterial strain, designated as 4C16AT, was isolated from a tidal flat sediment and characterized by using a polyphasic taxonomic approach. Strain 4C16AT was found to grow at 10–40 °C (optimum, 28 °C), at pH 5.0–10.0 (optimum, pH 6.0–7.0) and in 0–6 % (w/v) NaCl (optimum, 1 %). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 4C16AT fell into the genus Roseibium , and shared the highest identity of 98.9 % with the closest type strain Roseibium suaedae KACC 13772T and less than 98.0 % identity with other type strains of recognized species within this genus. The phylogenomic analysis indicated that strain 4C16AT formed an independent branch within this genus. The 28.6 % digital DNA–DNA hybridization estimate and 85.0 % average nucleotide identity between strains 4C16AT and R. suaedae KACC 13772T were the highest, but still far below their respective threshold for species definition, implying that strain 4C16AT should represent a novel genospecies. The predominant cellular fatty acid was summed feature 8; the polar lipids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylmonomethylethanolamine; the respiratory quinones were Q-9 and Q-10. The genomic DNA G+C content was 59.8mol %. Based on phylogenetic analyses and phenotypic and chemotaxonomic characteristics, strain 4C16AT is concluded to represent a novel species of the genus Roseibium , for which the name Roseibium litorale sp. nov. is proposed. The type strain of the species is 4C16AT (=GDMCC 1.1932T=KACC 22078T). We also propose the reclassification of Labrenzia polysiphoniae as Roseibium polysiphoniae comb. nov. and ‘Labrenzia callyspongiae’ as Roseibium callyspongiae sp. nov.


2011 ◽  
Vol 61 (6) ◽  
pp. 1299-1303 ◽  
Author(s):  
Jitsopin Traiwan ◽  
Mi-Hak Park ◽  
Wonyong Kim

A Gram-positive, halophilic bacterium, strain CAU 9536T, was isolated from a tidal flat sediment in the Yellow Sea, Republic of Korea. Strain CAU 9536T grew optimally at 30 °C, at pH 9.0 and in the presence of 13.0 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CAU 9536T belonged to the genus Serinicoccus, and showed sequence similarity levels of 99.0 % to Serinicoccus profundi MCCC 1A05965T and 98.0 % to Serinicoccus marinus JC1078T. DNA–DNA relatedness values between strain CAU 9536T and the above two type strains were below 45.0 %. The cell-wall peptidoglycan of strain CAU 9536T was based on meso-diaminopimelic acid, in contrast to those of S. profundi and S. marinus. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine and phosphatidylinositol. Whole-cell hydrolysates contained mainly glucose and ribose. The major isoprenoid quinone was menaquinone MK-8 (H4), and the predominant cellular fatty acid was iso-C15 : 0. The DNA G+C content of strain CAU 9536T was 73.5 mol%. Based on phenotypic, chemotaxonomic and genotypic data, strain CAU 9536T is considered to represent a novel species of the genus Serinicoccus, for which the name Serinicoccus chungangensis sp. nov. is proposed. The type strain is CAU 9536T ( = KCTC 19774T = CCUG 59777T).


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