Cytochrome b (Cyt-b) gene sequence analysis in six flatfish species (Teleostei, Pleuronectidae), with phylogenetic and taxonomic insights

2007 ◽  
Vol 152 (4) ◽  
pp. 757-773 ◽  
Author(s):  
Y. P. Kartavtsev ◽  
T.-J. Park ◽  
K. A. Vinnikov ◽  
V. N. Ivankov ◽  
S. N. Sharina ◽  
...  
2016 ◽  
Vol 10 (7) ◽  
pp. e0004844 ◽  
Author(s):  
Hirotomo Kato ◽  
Eduardo A. Gomez ◽  
Luiggi Martini-Robles ◽  
Jenny Muzzio ◽  
Lenin Velez ◽  
...  

DNA Sequence ◽  
2008 ◽  
Vol 19 (6) ◽  
pp. 479-489 ◽  
Author(s):  
Yuri Ph. Kartavtsev ◽  
Svetlana N. Sharina ◽  
Tadasuke Goto ◽  
Anton Y. Chichvarkhin ◽  
Andrey A. Balanov ◽  
...  

2019 ◽  
Vol 18 (1) ◽  
Author(s):  
Jarulis Jarulis ◽  
Dedy Duryadi Solihin ◽  
Ani Mardiastuti ◽  
Lilik Budi Prasetyo

Genetic information of Indonesian hornbills (Julang) is still limited. We sequenced the cytochrome b gene of three hornbill species (Rhyticeros undulatus, R. plicatus, and Aceros cassidix) to explore their genetic variation, distance, and phylogenetic. Nine blood samples for Cyt b from three hornbill species were isolated with Dneasy® Blood and Tissue Kit base on Spin-Column Protocol, Qiagen. SNP, genetic distance, and phylogeny were calculated by MEGA 6.0 software. This study was found variations in the Cyt b gene sequence (849 bp) between three species Indonesian Julang. Rhyticeros undulatus had the most SNP compared to R. plicatus and Aceros cassidix. Substitution of synonyms is more common than substitution of synonyms and transition substitution frequency tends to be much higher than transversion substitution. The three species of Indonesian Julang were markedly separate with an average genetic distance of 5.25%. and separated with the outgroup species at a genetic distance of 9.43%. Cytochrome b sequence genes from these three hornbill species are novel for identifying and classifying hornbills, and could be applied to prevent illegal poaching and conservation management in Indonesia.    


1997 ◽  
Vol 68 (2) ◽  
pp. 148-155 ◽  
Author(s):  
Katsumi ARAI ◽  
Isao MUNECHIKA ◽  
Isao ITO ◽  
Akio KIKKAWA ◽  
Kojiro NAKAMURA ◽  
...  

2009 ◽  
Vol 75 (10) ◽  
pp. 3348-3351 ◽  
Author(s):  
Jill Tomaras ◽  
Jason W. Sahl ◽  
Robert L. Siegrist ◽  
John R. Spear

ABSTRACT Microbial diversity of septic tank effluent (STE) and the biomat that is formed as a result of STE infiltration on soil were characterized by 16S rRNA gene sequence analysis. Results indicate that microbial communities are different within control soil, STE, and the biomat and that microbes found in STE are not found in the biomat. The development of a stable soil biomat appears to provide the best on-site water treatment or protection for subsequent groundwater interactions of STE.


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