Genetic diversity and population structure of Eleutheronema rhadinum in the East and South China Seas revealed in mitochondrial COI sequences

2013 ◽  
Vol 31 (6) ◽  
pp. 1276-1283 ◽  
Author(s):  
Xinxu Sun ◽  
Dongdong Xu ◽  
Bao Lou ◽  
Tao Zhang ◽  
Jian Xin ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
South China ◽  
China Seas ◽  
Mitochondrial Coi ◽  
Coi Sequences ◽  
Eleutheronema Rhadinum

Genetic diversity and population structure of Sepia officinalis from the Tunisian cost revealed by mitochondrial COI sequences

2014 ◽  
Vol 42 (1) ◽  
pp. 77-86 ◽  
Author(s):  
Tir Meriam ◽  
Tombari Wafa ◽  
Telahigue Khawla ◽  
Hajji Tarek ◽  
Ghram Abdeljelil ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Sepia Officinalis ◽  
Mitochondrial Coi ◽  
Coi Sequences

scholarly journals Genetic Diversity and Abundance of Flavobacterial Proteorhodopsin in China Seas

2008 ◽  
Vol 75 (2) ◽  
pp. 529-533 ◽  
Author(s):  
Meiru Zhao ◽  
Feng Chen ◽  
Nianzhi Jiao
Keyword(s):  
Genetic Diversity ◽  
South China ◽  
Metagenomic Data ◽  
China Seas ◽  
Geographic Pattern ◽  
Pr Genes

ABSTRACT Proteorhodopsin (PR) genes related to Flavobacteria were found to be highly diverse in the East and South China seas and displayed a distinct geographic pattern, which appeared to reflect cold versus warm adaptation when Global Oceanic Sampling database metagenomic data were included. Flavobacterial PR genes were more abundant offshore than nearshore, implying that inheritance of the PR gene could be important for Flavobacteria living in the oligotrophic environment.

Genetic diversity and population structure of small yellow croaker (Larimichthys polyactis) in the Yellow and East China seas based on microsatellites

2019 ◽  
Vol 32 ◽  
pp. 16
Author(s):  
Qiqun Cheng ◽  
Wenming Chen ◽  
Li Ma
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Genetic Differentiation ◽  
East China ◽  
Rank Test ◽  
Northwestern Pacific ◽  
Allele Frequency Distribution ◽  
China Seas ◽  
Larimichthys Polyactis ◽  
Small Yellow Croaker

Small yellow croaker (Larimichthys polyactis), a member of family Sciaenidae, is mainly distributed in the northwestern Pacific Ocean. To assess the genetic diversity and population structure of this species across its range, we genotyped 150 L. polyactis individuals sampled in five locations along the coast of the Yellow and East China seas using 20 polymorphic microsatellites. A total of 499 alleles were detected at 20 loci across all individuals, and a relatively high level of genetic diversity was observed, with observed heterozygosity (Ho), expected heterozygosity (He) and polymorphic information content (PIC) ranging from 0.233 to 1.000, from 0.438 to 0.955, and from 0.367 to 0.953 per locus-location combination, respectively. Analysis of molecular variance (AMOVA) (FST = 0.00915, P < 0.001), pairwise FST, and corrected average pairwise differences indicated that there was extremely low, but statistically significant genetic differentiation among the studied populations. However, Bayesian assignment analysis revealed a high number of immigrants among populations and no obvious genetic differentiation. The Wilcoxon signed-rank test and mode-shift indicator of allele frequency distribution support the inferrence that L. polyactis had not experienced a recent genetic bottleneck. Overall, the results suggest that, despite low genetic differentiation in this species, the small yellow croaker forms a single panmictic population with high genetic variation and gene flow in the studied area. This study will provide useful information for conservation and sustainable exploitation of this important aquatic living resource.

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