Structural analysis and molecular dynamics simulations of novel δ-endotoxin Cry1Id from Bacillus thuringiensis to pave the way for development of novel fusion proteins against insect pests of crops

2013 ◽  
Vol 19 (12) ◽  
pp. 5301-5316 ◽  
Author(s):  
Budheswar Dehury ◽  
Mousumi Sahu ◽  
Jagajjit Sahu ◽  
Kishore Sarma ◽  
Priyabrata Sen ◽  
...  
Keyword(s):  
Molecular Dynamics ◽  
Structural Analysis ◽  
Bacillus Thuringiensis ◽  
Molecular Dynamics Simulations ◽  
Fusion Proteins ◽  
Insect Pests ◽  
Dynamics Simulations ◽  
The Way

scholarly journals Insight into the origin of SARS-CoV-2 through structural analysis of receptor recognition: a molecular simulation study

RSC Advances ◽  
2021 ◽  
Vol 11 (15) ◽  
pp. 8718-8729
Author(s):  
Jixue Sun ◽  
Meijiang Liu ◽  
Na Yang
Keyword(s):  
Molecular Dynamics ◽  
Structural Analysis ◽  
Molecular Dynamics Simulations ◽  
Molecular Simulation ◽  
Simulation Study ◽  
Receptor Recognition ◽  
Dynamics Simulations ◽  
Insight Into

The origin of SARS-CoV-2 through structural analysis of receptor recognition was investigated by molecular dynamics simulations.

Molecular dynamics simulations of the Ca2+-pump: a structural analysis

2012 ◽  
Vol 14 (10) ◽  
pp. 3543 ◽  
Author(s):  
Anders Lervik ◽  
Fernando Bresme ◽  
Signe Kjelstrup
Keyword(s):  
Molecular Dynamics ◽  
Structural Analysis ◽  
Molecular Dynamics Simulations ◽  
Dynamics Simulations

Structural analysis of the inhibition of APRIL by TACI and BCMA through molecular dynamics simulations

2013 ◽  
Vol 39 ◽  
pp. 13-22 ◽  
Author(s):  
Maite González-Mendióroz ◽  
Ana Belén Álvarez-Vázquez ◽  
Jaime Rubio-Martinez
Keyword(s):  
Molecular Dynamics ◽  
Structural Analysis ◽  
Molecular Dynamics Simulations ◽  
Dynamics Simulations

scholarly journals Exploring GPCR–Lipid Interactions by Molecular Dynamics Simulations: Excitements, Challenges, and the Way Forward

2018 ◽  
Vol 122 (22) ◽  
pp. 5727-5737 ◽  
Author(s):  
Durba Sengupta ◽  
Xavier Prasanna ◽  
Madhura Mohole ◽  
Amitabha Chattopadhyay
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulations ◽  
Lipid Interactions ◽  
Dynamics Simulations ◽  
The Way

Application of molecular dynamics simulations to design a dual-purpose oligopeptide linker sequence for fusion proteins

2018 ◽  
Vol 24 (11) ◽  
Author(s):  
Ehsan Rezaie ◽  
Mozafar Mohammadi ◽  
Amirhossein Sakhteman ◽  
Peyman Bemani ◽  
Sajjad Ahrari
Keyword(s):  
Molecular Dynamics ◽  
Molecular Dynamics Simulations ◽  
Fusion Proteins ◽  
Dual Purpose ◽  
Linker Sequence ◽  
Dynamics Simulations

scholarly journals Selectivity of pyoverdine recognition by the FpvA receptor of Pseudomonas aeruginosa from molecular dynamics simulations

2015 ◽  
Vol 17 (27) ◽  
pp. 18022-18034 ◽  
Author(s):  
Benjamin Bouvier ◽  
Christine Cézard ◽  
Pascal Sonnet
Keyword(s):  
Molecular Dynamics ◽  
Pseudomonas Aeruginosa ◽  
Molecular Dynamics Simulations ◽  
Dynamics Simulations ◽  
Novel Antibiotics ◽  
The Way

Understanding the patterns of pyoverdine recognition by the bacterial FpvA receptor paves the way for the design of novel antibiotics.

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