Microsatellite marker based analysis of genetic diversity in short day tropical Indian onion and cross amplification in related Allium spp.

2010 ◽  
Vol 58 (5) ◽  
pp. 741-752 ◽  
Author(s):  
Anil Khar ◽  
K. E. Lawande ◽  
K. S. Negi
Genetica ◽  
2009 ◽  
Vol 137 (3) ◽  
pp. 293-304 ◽  
Author(s):  
Tereza Cristina de Oliveira Borba ◽  
Rosana Pereira Vianello Brondani ◽  
Paulo Hideo Nakano Rangel ◽  
Claudio Brondani

2015 ◽  
Vol 38 (1) ◽  
pp. 12-17
Author(s):  
W A Septian ◽  
Jakaria Jakaria ◽  
C Sumantri

2010 ◽  
Vol 53 (2) ◽  
pp. 389-396 ◽  
Author(s):  
Jayme Aparecido Povh ◽  
Ricardo Pereira Ribeiro ◽  
Rodolfo Nadez Sirol ◽  
Danilo Pedro Streit Jr. ◽  
Heden Luiz Marques Moreira ◽  
...  

The objective of this study was to evaluate the genetic diversity and the parental contribution of Piaractus mesopotamicus in the production of offspring in the semi-natural system of reproduction. Twenty parental fishes (eleven males and nine females) and the total of 100 larvae were evaluated by microsatellite marker. The parents and offspring had thirty-one alleles and heterozygosity of 0.550 and 0.563, respectively. The females were fertilised by two up to six males while the males fertilised three up to five females. The contribution of the females and males to the offspring were 66.6 and 58%, respectively. Such results indicated no loss in the genetic variability in the offspring, and the parents had multiple paternity and reasonable contribution to the offspring production.


2015 ◽  
Vol 25 (6) ◽  
pp. 624-630 ◽  
Author(s):  
Yun Ho Choy ◽  
Joo Hee Seo ◽  
Byungho Park ◽  
Seung Soo Lee ◽  
Jae Won Choi ◽  
...  

2010 ◽  
Vol 135 (2) ◽  
pp. 143-149 ◽  
Author(s):  
Kirk W. Pomper ◽  
Jeremiah D. Lowe ◽  
Li Lu ◽  
Sheri B. Crabtree ◽  
Shandeep Dutta ◽  
...  

Pawpaw [Asimina triloba (L.) Dunal.], a tree fruit native to eastern North America, is in the beginning stages of commercialization. Cultivars available in the early 20th century have been lost, and significant genetic erosion may have occurred. Polymorphic microsatellite marker loci were developed from enriched genomic libraries. Five marker loci were used to fingerprint 28 cultivars and 13 selections. For the 41 genotypes, 102 alleles were amplified and major allele frequency (0.16–0.94), number of genotypes (2–27), and allele size (144–343 bp) varied greatly by locus. Four loci were highly polymorphic, as indicated by values for expected heterozygosity (He), observed heterozygosity (Ho), and polymorphism information content, but only two alleles were detected at locus Pp-C104. A high level of genetic diversity was observed in the studied genotypes. The Ho (0.68) and He (0.70) were similar and indicated few null alleles. In the 41 genotypes, 39 unique fingerprints were observed. These new microsatellite marker loci will be useful for cultivar fingerprinting, management of collections, and investigation of genetic diversity in collections and wild populations. Grouping of genotypes in an unweighted pair group method with arithmetic mean dendrogram was generally consistent with their origins.


2020 ◽  
Vol 13 (1) ◽  
Author(s):  
Franco F. Roldán Gallardo ◽  
Karen E. DeMatteo ◽  
Miguel A. Rinas ◽  
Carina F. Argüelles

Abstract Objective This study was designed to facilitate genetic studies that would allow information on population structure and genetic diversity of natural or captive stocks of paca (Cuniculus paca), a species of ecological and socioeconomic importance, by testing cross-amplification of 20 heterologous microsatellite primer pairs developed for guinea pigs (Cavia porcellus) and capybara (Hydrochoerus hydrochaeris). Results Those primers that showed the best amplification profile in blood samples were subsequently applied to scats and saliva samples, to evaluate their efficiency. Of the 13 microsatellite pairs that amplified in blood, one-third (32%) were successfully amplified in saliva and scat samples. This initial work demonstrates successful cross-amplification in paca providing a solid and promising foundation for future genetic studies with this species. The ability to quantify genetic diversity using noninvasive samples from free-ranging paca is essential to developing applied management strategies for this large neotropical rodent that is not only a prey favored by wide-ranging carnivores [e.g., jaguar (Panthera onca), puma (Puma concolor)], but is also a species targeted by illegal hunting and wildlife trade.


2021 ◽  
Vol 55 (1) ◽  
pp. 83-90
Author(s):  
Sang-Won Suh ◽  
◽  
Do-Hyun Kim ◽  
Sang-Woo Kim ◽  
Byoung-Ho Park ◽  
...  

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