Deciphering ephedrine inclusion complexes with β-cyclodextrin, 18-crown-6 and cucurbit[7]uril using spectral and molecular modeling methods

2018 ◽  
Vol 93 (3-4) ◽  
pp. 157-172
Author(s):  
Suad K. S. Al-Burtomani ◽  
FakhrEldin O. Suliman
Author(s):  
Balazs Balogh ◽  
Anna Carbone ◽  
Virginia Spanò ◽  
Alessandra Montalbano ◽  
Paola Barraja ◽  
...  

2021 ◽  
pp. 116790
Author(s):  
Ping Han ◽  
Yuanyuan Zhong ◽  
Ning An ◽  
Shiling Lu ◽  
Qingling Wang ◽  
...  

2021 ◽  
pp. 115924
Author(s):  
Sepideh Najar-Ahmadi ◽  
Hossein Haghaei ◽  
Safar Farajnia ◽  
Reza Yekta ◽  
Jafar Ezzati Nazhad Dolatabadi ◽  
...  

2012 ◽  
Vol 39 (3) ◽  
pp. 1257-1267 ◽  
Author(s):  
Xiaoli Xi ◽  
Manman Yang ◽  
Tinggui Cheng ◽  
Liwei Zhang ◽  
Pin Yang

2021 ◽  
Vol 4 (3) ◽  
pp. e00145
Author(s):  
K.A. Shcherbakov ◽  
D.S. Shcherbinin ◽  
A.V. Veselovsky

Prostate cancer is hormone-dependent and the androgen receptor (AR) is involved in its development. AR is a transcription factor that is activated by ligand binding, result in its translocation into the nucleus, where it initiates gene transcription. In an inactive state in cytoplasm AR exists as a complex with heat shock protein 90 (HSP90) and some other proteins. When the agonist binds, a conformational change in AR occurs, resulting in HSP90 and other chaperones dissociating. Recently it has been shown that for the dissociation of the HSP90-AR complex and the translocation of the latter into the nucleus, phosphorylation of the Thr-90 residue of the N-terminal domain of HSP90 is necessary. In this work, the effect of the HSP90 inhibitor, heldanamycin, interacting with the ATP-binding site, on the Thr90 phosphorylation site was investigated by molecular modeling methods. It has been shown that inhibitor binding slightly affects the size and mobility of cavity around Thr90. It is suggested that inhibitor binding to HSP90 does not result in changing the protein structure and does not influence on protein phosphorylation, and partially explains low effectiveness of such type of drugs in the therapy of prostate cancer.


2013 ◽  
Vol 11 (3(43)) ◽  
pp. 3-8
Author(s):  
O. I. Kalchenko ◽  
S. O. Cherenok ◽  
V. I. Kalchenko ◽  
A. V. Solovyov ◽  
V. V. Gorbatchuk

2009 ◽  
Vol 23 (5-6) ◽  
pp. 271-279 ◽  
Author(s):  
Yun Wu ◽  
Hui Mao ◽  
Bo Zhao ◽  
Jian Shen

The interaction of clenbuterol hydrochloride (CL) to bovine hemoglobin (BHb) under physiological conditions was investigated by using UV-vis absorption, fluorescence, circular dichroism (CD) and molecular modeling. The fluorescence intensity of BHb decreased regularly with the gradual increasing concentration of CL. It is observed that there was a prominent interaction between CL and BHb. The fluorescence data revealed that the fluorescence quenching is a static process, and the thermodynamic parameters were calculated according to the Van't Hoff equation. The alternations of protein secondary structure in the presence of CL were determined by the evidence of CD. Molecular modeling study that corroborate our experimental results revealed that the binding mode of CL–BHb complex could be attributed to the hydrophobic interaction and hydrogen bonding, but electronic interaction cannot be excluded.


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