Karyotype and genomic in situ hybridization pattern in ×Brassicoraphanus, an intergeneric hybrid between Brassica campestris ssp. pekinensis and Raphanus sativus

The genomic constitution of two species in the genus Psammopyrum, i.e., Ps. athericum (2n = 6x = 42) and Ps. pungens (2n = 8x = 56), was studied by genomic in situ hybridization (GISH). In Ps. athericum, one diploid chromosome set hybridized to a genomic probe from Pseudoroegneria ferganensis (St genome), one diploid set to a probe from Agropyron cristatum (P genome), and one diploid set to a probe from Thinopyrum junceiforme (EbEe genomes) or Th. bessarabicum (Eb genome). Substituting the St-genome probe with an L-genome probe from Festucopsis serpentinii resulted in exactly the same hybridization pattern, suggesting a genomic constitution of EStP or ELP for Ps. athericum. The same probes used on Ps. pungens showed two diploid sets of chromosomes hybridizing to the St-genome probe, one diploid set hybridizing to the P-genome probe, and one diploid set hybridizing to the EbEe-genome probe. The L-genome probe hybridized to approximately 14 of the chromosomes that were labeled by the St-genome probe. Hence the genomic constitution for Ps. pungens is proposed to be EStStP or EStLP.Key Words: Psammopyrum athericum, Psammopyrum pungens, in situ hybridization, Elytrigia pycnantha, Elytrigia pungens, genome analysis.

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Genomic in situ hybridization differentiates between A/D- and C-genome chromatin and detects intergenomic translocations in polyploid oat species (genus Avena)

Genome ◽

10.1139/g94-087 ◽

1994 ◽

Vol 37 (4) ◽

pp. 613-618 ◽

Cited By ~ 98

Author(s):

E. N. Jellen ◽

B. S. Gill ◽

T. S. Cox

Keyword(s):

In Situ Hybridization ◽

Avena Sativa ◽

Genomic In Situ Hybridization ◽

Hybridization Pattern ◽

C Banding ◽

Intergenomic Translocations ◽

C Genome ◽

Total Dna

The genomic in situ hybridization (GISH) technique was used to discriminate between chromosomes of the C genome and those of the A and A/D genomes in allopolyploid oat species (genus Avena). Total biotinylated DNA from A. strigosa (2n = 2x = 14, AsAs genome) was mixed with sheared, unlabelled total DNA from A. eriantha (2n = 2x = 14, CpCp) at a ratio of 1:200 (labelled to unlabelled). The resulting hybridization pattern consisted of 28 mostly labelled and 14 mostly unlabelled chromosomes in the hexaploids. Attempts to discriminate between chromosomes of the A and D genomes in A. sativa (2n = 6x = 42, AACCDD) were unsuccessful using GISH. At least eight intergenomic translocation segments were detected in A. sativa 'Ogle', several of which were not observed in A. byzantina 'Kanota' (2n = 6x = 42, AACCDD) or in A. sterilis CW 439-2 (2n = 6x = 42, AACCDD). At least five intergenomic translocation segments were observed in A. maroccana CI 8330 'Magna' (2n = 4x = 28, AACC). In both 'Ogle' and 'Magna', positions of most of these translocations matched with C-banding patterns.Key words: Avena sativa, oat, in situ hybridization, C-banding, Avena macrostachya.

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PARENTAL GENOME DIFFERENTIATION BY GENOMIC IN SITU HYBRIDIZATION (GISH) IN INTERGENERIC HYBRID OF SACCHARUM X ZEA

Journal of Sugarcane Research ◽

10.37580/jsr.2019.2.9.130-137 ◽

2019 ◽

Vol 9 (2) ◽

pp. 130

Author(s):

VP Sobhakumari

Keyword(s):

In Situ Hybridization ◽

Intergeneric Hybrid ◽

Genomic In Situ Hybridization ◽

Parental Genome ◽

Genome Differentiation

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Fluorescence in situ hybridization and genomic in situ hybridization to identify the parental genomes in the intergeneric hybrid between Chrysanthemum japonicum and Nipponanthemum nipponicum

Chromosome Botany ◽

10.3199/iscb.1.7 ◽

2006 ◽

Vol 1 (1) ◽

pp. 7-11 ◽

Cited By ~ 25

Author(s):

Magdy Hussein Abd El-Twab ◽

Katsuhiko Kondo

Keyword(s):

In Situ Hybridization ◽

Fluorescence In Situ Hybridization ◽

Intergeneric Hybrid ◽

Genomic In Situ Hybridization

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Evolutionary dynamics and chromosomal distribution of repetitive sequences on chromosomes of Aegilops speltoides revealed by genomic in situ hybridization

Heredity ◽

10.1046/j.1365-2540.2001.00891.x ◽

2001 ◽

Vol 86 (6) ◽

pp. 738-742 ◽

Cited By ~ 7

Author(s):

Alexander Belyayev ◽

Olga Raskina ◽

Eviatar Nevo

Keyword(s):

In Situ Hybridization ◽

Evolutionary Dynamics ◽

Repetitive Sequences ◽

Genomic In Situ Hybridization ◽

Aegilops Speltoides ◽

Chromosomal Distribution

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Synthesis and cytological characterization of trigeneric hybrids of durum wheat with and without Ph1

Genome ◽

10.1139/g04-082 ◽

2004 ◽

Vol 47 (6) ◽

pp. 1173-1181 ◽

Cited By ~ 28

Author(s):

Prem P Jauhar ◽

M Doğramaci ◽

T S Peterson

Keyword(s):

In Situ Hybridization ◽

Chromosome Pairing ◽

Genetic Recombination ◽

Genomic In Situ Hybridization ◽

Homoeologous Pairing ◽

Alien Gene Transfer ◽

Chromosome 5B ◽

Alien Gene ◽

Trigeneric Hybrids

Wild grasses in the tribe Triticeae, some in the primary or secondary gene pool of wheat, are excellent reservoirs of genes for superior agronomic traits, including resistance to various diseases. Thus, the diploid wheatgrasses Thinopyrum bessarabicum (Savul. and Rayss) Á. Löve (2n = 2x = 14; JJ genome) and Lophopyrum elongatum (Host) Á. Löve (2n = 2x = 14; EE genome) are important sources of genes for disease resistance, e.g., Fusarium head blight resistance that may be transferred to wheat. By crossing fertile amphidiploids (2n = 4x = 28; JJEE) developed from F1 hybrids of the 2 diploid species with appropriate genetic stocks of durum wheat, we synthesized trigeneric hybrids (2n = 4x = 28; ABJE) incorporating both the J and E genomes of the grass species with the durum genomes A and B. Trigeneric hybrids with and without the homoeologous-pairing suppressor gene, Ph1, were produced. In the absence of Ph1, the chances of genetic recombination between chromosomes of the 2 useful grass genomes (JE) and those of the durum genomes (AB) would be enhanced. Meiotic chromosome pairing was studied using both conventional staining and fluorescent genomic in situ hybridization (fl-GISH). As expected, the Ph1-intergeneric hybrids showed low chromosome pairing (23.86% of the complement), whereas the trigenerics with ph1b (49.49%) and those with their chromosome 5B replaced by 5D (49.09%) showed much higher pairing. The absence of Ph1 allowed pairing and, hence, genetic recombination between homoeologous chromosomes. Fl-GISH analysis afforded an excellent tool for studying the specificity of chromosome pairing: wheat with grass, wheat with wheat, or grass with grass. In the trigeneric hybrids that lacked chromosome 5B, and hence lacked the Ph1 gene, the wheat–grass pairing was elevated, i.e., 2.6 chiasmata per cell, a welcome feature from the breeding standpoint. Using Langdon 5D(5B) disomic substitution for making trigeneric hybrids should promote homoeologous pairing between durum and grass chromosomes and hence accelerate alien gene transfer into the durum genomes.Key words: alien gene transfer, chiasma (xma) frequency, chromosome pairing, fluorescent genomic in situ hybridization (fl-GISH), homoeologous-pairing regulator, specificity of chromosome pairing, wheatgrass.

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