scholarly journals Expression of symptoms, viral coat protein and silencing suppressor gene during mixed infection of a N–Wi strain of potato virus Y and an asymptomatic strain of potato virus X

VirusDisease ◽  
2014 ◽  
Vol 25 (3) ◽  
pp. 314-321 ◽  
Author(s):  
D. M. J. B. Senanayake ◽  
B. Mandal
1996 ◽  
Vol 10 (5) ◽  
pp. 805-813 ◽  
Author(s):  
K.J. Oparka ◽  
A.G. Roberts ◽  
I.M. Roberts ◽  
D.A.M. Prior ◽  
S. Cruz

Acta Naturae ◽  
2011 ◽  
Vol 3 (3) ◽  
pp. 40-46 ◽  
Author(s):  
M V Arkhipenko ◽  
E K Petrova ◽  
N A Nikitin ◽  
A D Protopopova ◽  
E V Dubrovin ◽  
...  

Virology ◽  
2001 ◽  
Vol 286 (2) ◽  
pp. 466-474 ◽  
Author(s):  
J.G. Atabekov ◽  
N.P. Rodionova ◽  
O.V. Karpova ◽  
S.V. Kozlovsky ◽  
V.K. Novikov ◽  
...  

1993 ◽  
Vol 28 (1) ◽  
pp. 29-35 ◽  
Author(s):  
Yehuda Stram ◽  
Ilan Sela ◽  
Orit Edelbaum ◽  
Edna Tanne ◽  
Miri Karchi ◽  
...  

1997 ◽  
Vol 142 (8) ◽  
pp. 1673-1680 ◽  
Author(s):  
R. Wanitchakorn ◽  
R. M. Harding ◽  
J. L. Dale

Plants ◽  
2021 ◽  
Vol 10 (4) ◽  
pp. 753
Author(s):  
Miroslav Glasa ◽  
Richard Hančinský ◽  
Katarína Šoltys ◽  
Lukáš Predajňa ◽  
Jana Tomašechová ◽  
...  

In recent years, high throughput sequencing (HTS) has brought new possibilities to the study of the diversity and complexity of plant viromes. Mixed infection of a single plant with several viruses is frequently observed in such studies. We analyzed the virome of 10 tomato and sweet pepper samples from Slovakia, all showing the presence of potato virus Y (PVY) infection. Most datasets allow the determination of the nearly complete sequence of a single-variant PVY genome, belonging to one of the PVY recombinant strains (N-Wi, NTNa, or NTNb). However, in three to-mato samples (T1, T40, and T62) the presence of N-type and O-type sequences spanning the same genome region was documented, indicative of mixed infections involving different PVY strains variants, hampering the automated assembly of PVY genomes present in the sample. The N- and O-type in silico data were further confirmed by specific RT-PCR assays targeting UTR-P1 and NIa genomic parts. Although full genomes could not be de novo assembled directly in this situation, their deep coverage by relatively long paired reads allowed their manual re-assembly using very stringent mapping parameters. These results highlight the complexity of PVY infection of some host plants and the challenges that can be met when trying to precisely identify the PVY isolates involved in mixed infection.


Sign in / Sign up

Export Citation Format

Share Document