Protein interaction sites obtained via sequence homology. The site of complexation of electron transfer partners of cytochrome c revealed by mapping amino acid substitutions onto three-dimensional protein surfaces

Cytochrome C (Fe2+) as a competitive inhibitor of NADPH-dependent reduction of cytochrome P450 LM2: Locating protein-protein interaction sites in microsomal electron carriers

Archives of Biochemistry and Biophysics ◽

10.1016/0003-9861(92)90677-o ◽

1992 ◽

Vol 297 (2) ◽

pp. 304-313 ◽

Cited By ~ 18

Author(s):

D.R. Davydov ◽

B.V. Darovsky ◽

I.R. Dedinsky ◽

I.P. Kanaeva ◽

G.I. Bachmanova ◽

...

Keyword(s):

Cytochrome P450 ◽

Cytochrome C ◽

Protein Interaction ◽

Competitive Inhibitor ◽

Interaction Sites ◽

Electron Carriers ◽

An algorithm for predicting protein-protein interaction sites: Abnormally exposed amino acid residues and secondary structure elements

Protein Science ◽

10.1110/ps.051589106 ◽

2006 ◽

Vol 15 (5) ◽

pp. 1017-1029 ◽

Cited By ~ 34

Author(s):

Jemima Hoskins ◽

Simon Lovell ◽

Tom L. Blundell

Keyword(s):

Amino Acid ◽

Secondary Structure ◽

Protein Interaction ◽

Amino Acid Residues ◽

Interaction Sites ◽

Searching for protein-protein interaction sites and docking by the methods of molecular dynamics, grid scoring, and the pairwise interaction potential of amino acid residues

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.20572 ◽

2005 ◽

Vol 60 (2) ◽

pp. 289-295 ◽

Cited By ~ 9

Author(s):

Genki Terashi ◽

Mayuko Takeda-Shitaka ◽

Daisuke Takaya ◽

Katsuichiro Komatsu ◽

Hideaki Umeyama

Keyword(s):

Molecular Dynamics ◽

Amino Acid ◽

Protein Interaction ◽

Interaction Potential ◽

Pairwise Interaction ◽

Amino Acid Residues ◽

Interaction Sites ◽

Prediction of potential protein-protein interaction sites from amino acid sequence

FEBS Letters ◽

10.1016/0014-5793(96)00327-4 ◽

1996 ◽

Vol 385 (1-2) ◽

pp. 81-86 ◽

Cited By ~ 56

Author(s):

R.Manjunatha Kini ◽

Herbert J. Evans

Keyword(s):

Amino Acid ◽

Amino Acid Sequence ◽

Protein Interaction ◽

Interaction Sites ◽

Amino acid substitutions at tryptophan-51 of cytochrome c peroxidase: effects on coordination, species preference for cytochrome c, and electron transfer

Biochemistry ◽

10.1021/bi00234a017 ◽

1991 ◽

Vol 30 (20) ◽

pp. 4953-4962 ◽

Cited By ~ 60

Author(s):

David B. Goodin ◽

Marilyn G. Davidson ◽

James A. Roe ◽

A. Grant Mauk ◽

Michael Smith

Keyword(s):

Electron Transfer ◽

Amino Acid ◽

Cytochrome C ◽

Cytochrome C Peroxidase ◽

Amino Acid Substitutions ◽

Species Preference

Structure-based prediction of protein-protein interaction sites

10.31274/etd-180810-1200 ◽

2012 ◽

Author(s):

Rafael Armando Jordan

Keyword(s):

Protein Interaction ◽

Interaction Sites ◽

PPIs Meta: A Meta-predictor of Protein-Protein Interaction Sites with Weighted Voting Strategy

Current Proteomics ◽

10.2174/1570164614666170306164127 ◽

2017 ◽

Vol 14 (3) ◽

Author(s):

Xiaowei Zhao ◽

Lingling Bao ◽

Xiaosa Zhao ◽

Minghao Yin

Keyword(s):

Protein Interaction ◽

Weighted Voting ◽

Interaction Sites ◽

Voting Strategy ◽

2P-243 The prediction of protein-protein interaction sites in sequences using a naive bayes classifier with a kernel density estimation(Bioinformatics:Functional genomics,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s145_2 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S145

Author(s):

Yoichi Murakami ◽

Kenji Mizuguchi

Keyword(s):

Annual Meeting ◽

Density Estimation ◽

Protein Interaction ◽

Kernel Density Estimation ◽

Kernel Density ◽

Bayes Classifier ◽

Interaction Sites ◽

Biophysical Society ◽

Hydrogen bond-linked pathways of peptide units and polar groups of amino acid residues suitable for electron transfer in cytochrome c proteins

Molecular and Cellular Biochemistry ◽

10.1007/s11010-018-3445-2 ◽

2018 ◽

Vol 453 (1-2) ◽

pp. 197-203 ◽

Cited By ~ 2

Author(s):

T. Ramasarma ◽

D. Vaigundan

Keyword(s):

Hydrogen Bond ◽

Electron Transfer ◽

Amino Acid ◽

Cytochrome C ◽

Amino Acid Residues ◽

Polar Groups ◽

C Proteins

STUDIES OF THE MOLECULAR LOCALIZATION OF PROTEIN-PROTEIN INTERACTION SITES IN THE LACTOSE SYNTHASE SYSTEM

Proteins in Biology and Medicine ◽

10.1016/b978-0-12-124580-1.50027-6 ◽

1982 ◽

pp. 379-393

Author(s):

Keith Brew ◽

Sudhir K. Sinha

Keyword(s):

Protein Interaction ◽

Interaction Sites ◽

Lactose Synthase ◽