Biomimetic Studies of the Mo/Cu Active Site of CO Dehydrogenase

Author(s):  
Neal P. Mankad ◽  
Dibbendu Ghosh
Keyword(s):  
Author(s):  
Matt C. Smith ◽  
Steven Longhurst ◽  
J. Elaine Barclay ◽  
Stephen P. Cramer ◽  
Sian C. Davies ◽  
...  

2007 ◽  
Vol 282 (14) ◽  
pp. 10639-10646 ◽  
Author(s):  
Seung-Wook Ha ◽  
Malgorzata Korbas ◽  
Mirjam Klepsch ◽  
Wolfram Meyer-Klaucke ◽  
Ortwin Meyer ◽  
...  

2004 ◽  
Vol 126 (17) ◽  
pp. 5382-5387 ◽  
Author(s):  
Holger Dobbek ◽  
Vitali Svetlitchnyi ◽  
Jago Liss ◽  
Ortwin Meyer

2021 ◽  
Vol 27 (3) ◽  
Author(s):  
Anna Rovaletti ◽  
Claudio Greco ◽  
Ulf Ryde

AbstractThe MoCu CO dehydrogenase enzyme not only transforms CO into CO2 but it can also oxidise H2. Even if its hydrogenase activity has been known for decades, a debate is ongoing on the most plausible mode for the binding of H2 to the enzyme active site and the hydrogen oxidation mechanism. In the present work, we provide a new perspective on the MoCu-CODH hydrogenase activity by improving the in silico description of the enzyme. Energy refinement—by means of the BigQM approach—was performed on the intermediates involved in the dihydrogen oxidation catalysis reported in our previously published work (Rovaletti, et al. “Theoretical Insights into the Aerobic Hydrogenase Activity of Molybdenum–Copper CO Dehydrogenase.” Inorganics 7 (2019) 135). A suboptimal description of the H2–HN(backbone) interaction was observed when the van der Waals parameters described in previous literature for H2 were employed. Therefore, a new set of van der Waals parameters is developed here in order to better describe the hydrogen–backbone interaction. They give rise to improved binding modes of H2 in the active site of MoCu CO dehydrogenase. Implications of the resulting outcomes for a better understanding of hydrogen oxidation catalysis mechanisms are proposed and discussed.


Inorganics ◽  
2019 ◽  
Vol 7 (11) ◽  
pp. 135
Author(s):  
Anna Rovaletti ◽  
Maurizio Bruschi ◽  
Giorgio Moro ◽  
Ugo Cosentino ◽  
Claudio Greco ◽  
...  

The Mo/Cu-dependent CO dehydrogenase from O. carboxydovorans is an enzyme that is able to catalyse CO oxidation to CO 2 ; moreover, it also expresses hydrogenase activity, as it is able to oxidize H 2 . Here, we have studied the dihydrogen oxidation catalysis by this enzyme using QM/MM calculations. Our results indicate that the equatorial oxo ligand of Mo is the best suited base for catalysis. Moreover, extraction of the first proton from H 2 by means of this basic centre leads to the formation of a Mo–OH–Cu I H hydride that allows for the stabilization of the copper hydride, otherwise known to be very unstable. In light of our results, two mechanisms for the hydrogenase activity of the enzyme are proposed. The first reactive channel depends on protonation of the sulphur atom of a Cu-bound cysteine residues, which appears to favour the binding and activation of the substrate. The second reactive channel involves a frustrated Lewis pair, formed by the equatorial oxo group bound to Mo and by the copper centre. In this case, no binding of the hydrogen molecule to the Cu center is observed but once H 2 enters into the active site, it can be split following a low-energy path.


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