The Chemistry of Small-Molecule Fluorogenic Probes

Author(s):  
Jonathan B. Grimm ◽  
Laurel M. Heckman ◽  
Luke D. Lavis
2020 ◽  
Author(s):  
Dianne Pham ◽  
Upamanyu Basu ◽  
Ivanna Pohorilets ◽  
Claudette M. St Croix ◽  
Simon Watkins ◽  
...  

<p>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) is a second messenger that mediates the biology of wound healing, apoptosis, inflammation, aging, neurodegenerative diseases, and more. Its presence has been fluorometrically imaged with protein- or small molecule-based sensors. However, only protein-based sensors have afforded temporal insights with the resolution of seconds. Small molecule-based fluorogenic probes are preferred for various reasons; however, current electrophilic chemosensors react with H<sub>2</sub>O<sub>2</sub> slowly, requiring >20 minutes for a sufficient response. Here, we report a fluorogenic probe that selectively reacts with H<sub>2</sub>O<sub>2</sub> and undergoes a [2,3]-sigmatropic rearrangement (seleno-Mislow-Evans rearrangement) followed by an acetal hydrolysis to produce a green fluorescent molecule in seconds. The mode of reaction is based on the umpolung of previously developed sensors; the probe acts as a nucleophile rather than an electrophile. The fast kinetics outcompete the reaction between thiols and H<sub>2</sub>O<sub>2</sub>, enabling real-time imaging of H<sub>2</sub>O<sub>2</sub> produced inside the subcellular compartments of cells in 8 seconds. Further, the probe was able to recapitulate data previously observed only with a genetically encoded protein-based sensor. The present probe design provides a platform that can match the temporal resolution of protein-based H<sub>2</sub>O<sub>2</sub> detection. </p>


2020 ◽  
Vol 11 (4) ◽  
pp. 1107-1113 ◽  
Author(s):  
Hai-Hao Han ◽  
Adam C. Sedgwick ◽  
Ying Shang ◽  
Na Li ◽  
Tingting Liu ◽  
...  

Herein, we report a protein-based hybridization strategy that exploits the host–guest chemistry of HSA (human serum albumin) to solubilize the otherwise cell impermeable ONOO− fluorescent probe Pinkment-OAc.


2020 ◽  
Author(s):  
Dianne Pham ◽  
Upamanyu Basu ◽  
Ivanna Pohorilets ◽  
Claudette M. St Croix ◽  
Simon Watkins ◽  
...  

<p>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) is a second messenger that mediates the biology of wound healing, apoptosis, inflammation, aging, neurodegenerative diseases, and more. Its presence has been fluorometrically imaged with protein- or small molecule-based sensors. However, only protein-based sensors have afforded temporal insights with the resolution of seconds. Small molecule-based fluorogenic probes are preferred for various reasons; however, current electrophilic chemosensors react with H<sub>2</sub>O<sub>2</sub> slowly, requiring >20 minutes for a sufficient response. Here, we report a fluorogenic probe that selectively reacts with H<sub>2</sub>O<sub>2</sub> and undergoes a [2,3]-sigmatropic rearrangement (seleno-Mislow-Evans rearrangement) followed by an acetal hydrolysis to produce a green fluorescent molecule in seconds. The mode of reaction is based on the umpolung of previously developed sensors; the probe acts as a nucleophile rather than an electrophile. The fast kinetics outcompete the reaction between thiols and H<sub>2</sub>O<sub>2</sub>, enabling real-time imaging of H<sub>2</sub>O<sub>2</sub> produced inside the subcellular compartments of cells in 8 seconds. Further, the probe was able to recapitulate data previously observed only with a genetically encoded protein-based sensor. The present probe design provides a platform that can match the temporal resolution of protein-based H<sub>2</sub>O<sub>2</sub> detection. </p>


2020 ◽  
Author(s):  
Dianne Pham ◽  
Upamanyu Basu ◽  
Ivanna Pohorilets ◽  
Claudette M. St Croix ◽  
Simon Watkins ◽  
...  

<p>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) is a second messenger that mediates the biology of wound healing, apoptosis, inflammation, aging, neurodegenerative diseases, and more. Its presence has been fluorometrically imaged with protein- or small molecule-based sensors. However, only protein-based sensors have afforded temporal insights with the resolution of seconds. Small molecule-based fluorogenic probes are preferred for various reasons; however, current electrophilic chemosensors react with H<sub>2</sub>O<sub>2</sub> slowly, requiring >20 minutes for a sufficient response. Here, we report a fluorogenic probe that selectively reacts with H<sub>2</sub>O<sub>2</sub> and undergoes a [2,3]-sigmatropic rearrangement (seleno-Mislow-Evans rearrangement) followed by an acetal hydrolysis to produce a green fluorescent molecule in seconds. The mode of reaction is based on the umpolung of previously developed sensors; the probe acts as a nucleophile rather than an electrophile. The fast kinetics outcompete the reaction between thiols and H<sub>2</sub>O<sub>2</sub>, enabling real-time imaging of H<sub>2</sub>O<sub>2</sub> produced inside the subcellular compartments of cells in 8 seconds. Further, the probe was able to recapitulate data previously observed only with a genetically encoded protein-based sensor. The present probe design provides a platform that can match the temporal resolution of protein-based H<sub>2</sub>O<sub>2</sub> detection. </p>


2014 ◽  
Vol 50 (97) ◽  
pp. 15319-15322 ◽  
Author(s):  
Qing Zhang ◽  
Hui Liu ◽  
Zhengying Pan

A general approach is presented for developing small molecule-based fluorogenic probes suitable for no-wash imaging of endogenous kinases in live cells.


2021 ◽  
Vol 57 (14) ◽  
pp. 1818-1821
Author(s):  
Huiying Mu ◽  
Koji Miki ◽  
Takuya Kubo ◽  
Koji Otsuka ◽  
Kouichi Ohe

Thiol-selective probes based on BODIPY scaffold were developed for sensing small-molecule thiols and unfolded proteins. The good organelle specificity of probe enables its utility for reporting the protein unfolding under ER stress in living cells.


2020 ◽  
Author(s):  
Dianne Pham ◽  
Upamanyu Basu ◽  
Ivanna Pohorilets ◽  
Claudette M. St Croix ◽  
Simon Watkins ◽  
...  

<p>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) is a second messenger that mediates the biology of wound healing, apoptosis, inflammation, aging, neurodegenerative diseases, and more. Its presence has been fluorometrically imaged with protein- or small molecule-based sensors. However, only protein-based sensors have afforded temporal insights with the resolution of seconds. Small molecule-based fluorogenic probes are preferred for various reasons; however, current electrophilic chemosensors react with H<sub>2</sub>O<sub>2</sub> slowly, requiring >20 minutes for a sufficient response. Here, we report a fluorogenic probe that selectively reacts with H<sub>2</sub>O<sub>2</sub> and undergoes a [2,3]-sigmatropic rearrangement (seleno-Mislow-Evans rearrangement) followed by an acetal hydrolysis to produce a green fluorescent molecule in seconds. The mode of reaction is based on the umpolung of previously developed sensors; the probe acts as a nucleophile rather than an electrophile. The fast kinetics outcompete the reaction between thiols and H<sub>2</sub>O<sub>2</sub>, enabling real-time imaging of H<sub>2</sub>O<sub>2</sub> produced inside the subcellular compartments of cells in 8 seconds. Further, the probe was able to recapitulate data previously observed only with a genetically encoded protein-based sensor. The present probe design provides a platform that can match the temporal resolution of protein-based H<sub>2</sub>O<sub>2</sub> detection. </p>


2020 ◽  
Vol 8 (43) ◽  
pp. 15135-15141
Author(s):  
Jing Yan ◽  
Yuan-Qiu-Qiang Yi ◽  
Jianqi Zhang ◽  
Huanran Feng ◽  
Yanfeng Ma ◽  
...  

Two non-fullerene small molecule acceptors, NT-4F and NT-4Cl, were designed and synthesized. Power conversion efficiencies of 11.44% and 14.55% were achieved for NT-4Cl-based binary and ternary devices, respectively.


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