scholarly journals Fenchel duality of Cox partial likelihood with an application in survival kernel learning

2021 ◽  
Vol 116 ◽  
pp. 102077
Author(s):  
Christopher M. Wilson ◽  
Kaiqiao Li ◽  
Qiang Sun ◽  
Pei Fen Kuan ◽  
Xuefeng Wang
2020 ◽  
Author(s):  
Christopher M. Wilson ◽  
Kaiqiao Li ◽  
Qiang Sun ◽  
Pei Fen Kuan ◽  
Xuefeng Wang

AbstractThe Cox proportional hazard model is the most widely used method in modeling time-to-event data in the health sciences. A common form of the loss function in machine learning for survival data is also mainly based on Cox partial likelihood function, due to its simplicity. However, the optimization problem becomes intractable when more complicated regularization is employed with the Cox loss function. In this paper, we show that a convex conjugate function of Cox loss function based on Fenchel Duality exists, and this provides an alternative framework to optimization based on the primal form. Furthermore, the dual form suggests an efficient algorithm for solving the kernel learning problem with censored survival outcomes. We illustrate the application of the derived duality form of Cox partial likelihood loss in the multiple kernel learning setting


Author(s):  
Guo ◽  
Xiaoqian Zhang ◽  
Zhigui Liu ◽  
Xuqian Xue ◽  
Qian Wang ◽  
...  

2021 ◽  
Vol 18 (1) ◽  
Author(s):  
Ulrike Baum ◽  
Sangita Kulathinal ◽  
Kari Auranen

Abstract Background Non-sensitive and non-specific observation of outcomes in time-to-event data affects event counts as well as the risk sets, thus, biasing the estimation of hazard ratios. We investigate how imperfect observation of incident events affects the estimation of vaccine effectiveness based on hazard ratios. Methods Imperfect time-to-event data contain two classes of events: a portion of the true events of interest; and false-positive events mistakenly recorded as events of interest. We develop an estimation method utilising a weighted partial likelihood and probabilistic deletion of false-positive events and assuming the sensitivity and the false-positive rate are known. The performance of the method is evaluated using simulated and Finnish register data. Results The novel method enables unbiased semiparametric estimation of hazard ratios from imperfect time-to-event data. False-positive rates that are small can be approximated to be zero without inducing bias. The method is robust to misspecification of the sensitivity as long as the ratio of the sensitivity in the vaccinated and the unvaccinated is specified correctly and the cumulative risk of the true event is small. Conclusions The weighted partial likelihood can be used to adjust for outcome measurement errors in the estimation of hazard ratios and effectiveness but requires specifying the sensitivity and the false-positive rate. In absence of exact information about these parameters, the method works as a tool for assessing the potential magnitude of bias given a range of likely parameter values.


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