scholarly journals Impacts of anthropogenic gadolinium on the activity of the ammonia oxidizing bacterium Nitrosomonas europaea

Chemosphere ◽  
2020 ◽  
Vol 257 ◽  
pp. 127250
Author(s):  
Yoshiko Fujita ◽  
Michelle Walton ◽  
Gaurav Das ◽  
Alice Dohnalkova ◽  
Gary Vanzin ◽  
...  
2005 ◽  
Vol 71 (12) ◽  
pp. 7980-7986 ◽  
Author(s):  
David G. Wahman ◽  
Lynn E. Katz ◽  
Gerald E. Speitel

ABSTRACT The ammonia-oxidizing bacterium Nitrosomonas europaea (ATCC 19718) was shown to degrade low concentrations (50 to 800 μg/liter) of the four trihalomethanes (trichloromethane [TCM], or chloroform; bromodichloromethane [BDCM]; dibromochloromethane [DBCM]; and tribromomethane [TBM], or bromoform) commonly found in treated drinking water. Individual trihalomethane (THM) rate constants ( \batchmode \documentclass[fleqn,10pt,legalpaper]{article} \usepackage{amssymb} \usepackage{amsfonts} \usepackage{amsmath} \pagestyle{empty} \begin{document} \(k_{1_{THM}}\) \end{document} ) increased with increasing THM bromine substitution, with TBM > DBCM > BDCM > TCM (0.23, 0.20, 0.15, and 0.10 liters/mg/day, respectively). Degradation kinetics were best described by a reductant model that accounted for two limiting reactants, THMs and ammonia-nitrogen (NH3-N). A decrease in the temperature resulted in a decrease in both ammonia and THM degradation rates with ammonia rates affected to a greater extent than THM degradation rates. Similarly to the THM degradation rates, product toxicity, measured by transformation capacity (Tc ), increased with increasing THM bromine substitution. Because both the rate constants and product toxicities increase with increasing THM bromine substitution, a water's THM speciation will be an important consideration for process implementation during drinking water treatment. Even though a given water sample may be kinetically favored based on THM speciation, the resulting THM product toxicity may not allow stable treatment process performance.


2003 ◽  
Vol 185 (21) ◽  
pp. 6496-6496 ◽  
Author(s):  
Patrick Chain ◽  
Jane Lamerdin ◽  
Frank Larimer ◽  
Warren Regala ◽  
Victoria Lao ◽  
...  

2007 ◽  
Vol 189 (11) ◽  
pp. 3935-3944 ◽  
Author(s):  
Paul M. Berube ◽  
Ram Samudrala ◽  
David A. Stahl

ABSTRACT The chemolithotrophic ammonia-oxidizing bacterium Nitrosomonas europaea is known to be highly resistant to starvation conditions. The transcriptional response of N. europaea to ammonia addition following short- and long-term starvation was examined by primer extension and S1 nuclease protection analyses of genes encoding enzymes for ammonia oxidation (amoCAB operons) and CO2 fixation (cbbLS), a third, lone copy of amoC (amoC 3 ), and two representative housekeeping genes (glyA and rpsJ). Primer extension analysis of RNA isolated from growing, starved, and recovering cells revealed two differentially regulated promoters upstream of the two amoCAB operons. The distal σ70 type amoCAB promoter was constitutively active in the presence of ammonia, but the proximal promoter was only active when cells were recovering from ammonia starvation. The lone, divergent copy of amoC (amoC 3 ) was expressed only during recovery. Both the proximal amoC 1,2 promoter and the amoC 3 promoter are similar to gram-negative σE promoters, thus implicating σE in the regulation of the recovery response. Although modeling of subunit interactions suggested that a nonconservative proline substitution in AmoC3 may modify the activity of the holoenzyme, characterization of a ΔamoC 3 strain showed no significant difference in starvation recovery under conditions evaluated. In contrast to the amo transcripts, a delayed appearance of transcripts for a gene required for CO2 fixation (cbbL) suggested that its transcription is retarded until sufficient energy is available. Overall, these data revealed a programmed exit from starvation likely involving regulation by σE and the coordinated regulation of catabolic and anabolic genes.


2007 ◽  
Vol 189 (24) ◽  
pp. 9090-9100 ◽  
Author(s):  
Baya Cherif-Zahar ◽  
Anne Durand ◽  
Ingo Schmidt ◽  
Nabila Hamdaoui ◽  
Ivan Matic ◽  
...  

ABSTRACT The family of ammonia and ammonium channel proteins comprises the Amt proteins, which are present in all three domains of life with the notable exception of vertebrates, and the homologous Rh proteins (Rh50 and Rh30) that have been described thus far only in eukaryotes. The existence of an RH50 gene in bacteria was first revealed by the genome sequencing of the ammonia-oxidizing bacterium Nitrosomonas europaea. Here we have used a phylogenetic approach to study the evolution of the N. europaea RH50 gene, and we show that this gene, probably as a component of an integron cassette, has been transferred to the N. europaea genome by horizontal gene transfer. In addition, by functionally characterizing the Rh50 Ne protein and the corresponding knockout mutant, we determined that NeRh50 can mediate ammonium uptake. The RH50Ne gene may thus have replaced functionally the AMT gene, which is missing in the genome of N. europaea and may be regarded as a case of nonorthologous gene displacement.


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