Rapid genome sequencing and characterization of novel avian-origin influenza A H7N9 virus directly from clinical sample by semiconductor sequencing

2015 ◽  
Vol 73 ◽  
pp. 84-88 ◽  
Author(s):  
Yongfeng Hu ◽  
Xianwen Ren ◽  
Li Li ◽  
Yan Xiao ◽  
Jie Dong ◽  
...  
Keyword(s):  
Genome Sequencing ◽  
Influenza A ◽  
Clinical Sample ◽  
H7n9 Virus ◽  
Semiconductor Sequencing ◽  
Avian Origin

Rapid hemagglutinin subtyping of novel avian-origin influenza A(H7N9) virus using a diagnostic microarray

2014 ◽  
Vol 8 (1) ◽  
pp. 55-59 ◽  
Author(s):  
Dong-Hun Lee ◽  
Ji-Hoon Kim ◽  
Seong-Su Yuk ◽  
Jung-Hoon Kwon ◽  
Hyunseok Cho ◽  
...  
Keyword(s):  
Influenza A ◽  
H7n9 Virus ◽  
Avian Origin

scholarly journals Complete genome analysis identifies Tvärminne avian virus as a candidate new species within the genus Orthoreovirus

2014 ◽  
Vol 95 (4) ◽  
pp. 898-904 ◽  
Author(s):  
Eszter Dandár ◽  
Eili Huhtamo ◽  
Szilvia L. Farkas ◽  
Miklós Oldal ◽  
Ferenc Jakab ◽  
...  
Keyword(s):  
Neurological Disorders ◽  
Phylogenetic Analyses ◽  
Virus Species ◽  
Sea Lion ◽  
Avian Virus ◽  
Semiconductor Sequencing ◽  
Avian Origin ◽  
Complete Genome Analysis ◽  
Strain Genome

Orthoreoviruses have been associated with a variety of diseases in domesticated poultry and wild-living birds. In 2002, a reovirus strain named Tvärminne avian virus (TVAV), was identified in Finland in a crow showing neurological disorders. The objective of this study was the molecular characterization of this novel reovirus strain. Genome sequencing was performed by combining semiconductor sequencing and traditional capillary sequencing. Sequence and phylogenetic analyses showed that TVAV shares low nucleotide sequence identity with other reoviruses (range for each gene, 31–72 %) including strains belonging to the species Avian orthoreovirus. The most closely related reovirus strain was an isolate identified in Steller sea lion. Our data indicate that TVAV is a divergent reovirus of avian origin that may be the first representative of a distinct virus species within the genus Orthoreovirus.

scholarly journals Human Infection with a Novel Avian-Origin Influenza A (H7N9) Virus

2013 ◽  
Vol 368 (20) ◽  
pp. 1888-1897 ◽  
Author(s):  
Rongbao Gao ◽  
Bin Cao ◽  
Yunwen Hu ◽  
Zijian Feng ◽  
Dayan Wang ◽  
...  
Keyword(s):  
Influenza A ◽  
Human Infection ◽  
H7n9 Virus ◽  
Avian Origin

scholarly journals The evolution and characterization of influenza A(H7N9) virus under the selective pressure of peramivir

Virology ◽  
2019 ◽  
Vol 536 ◽  
pp. 58-67 ◽  
Author(s):  
Yiyue Ge ◽  
Ying Chi ◽  
Xiaoyan Min ◽  
Kangchen Zhao ◽  
Bin Wu ◽  
...  
Keyword(s):  
Influenza A ◽  
Selective Pressure ◽  
H7n9 Virus

scholarly journals Epidemiologic characterization of 30 confirmed cases of human infection with avian influenza A(H7N9) virus in Hangzhou, China

2014 ◽  
Vol 14 (1) ◽  
Author(s):  
Hua Ding ◽  
Li Xie ◽  
Zhou Sun ◽  
Qing-Jun Kao ◽  
Ren-Jie Huang ◽  
...  
Keyword(s):  
Avian Influenza ◽  
Influenza A ◽  
Human Infection ◽  
H7n9 Virus

scholarly journals Molecular characterization of influenza A (H7N9) virus from the first imported H7N9 infection case in Malaysia

2014 ◽  
Vol 6 (2) ◽  
pp. 19-27 ◽  
Author(s):  
S. Jeyanthi ◽  
Rogayah T. A. R. Tengku ◽  
R. Thayan ◽  
A. Az-UlHusna ◽  
A. Aruna ◽  
...  
Keyword(s):  
Molecular Characterization ◽  
Influenza A ◽  
H7n9 Virus ◽  
H7n9 Infection
Sign in / Sign up

Export Citation Format

Share Document