Identification and expression analysis of the ZRT, IRT-like protein (ZIP) gene family in Camellia sinensis (L.) O. Kuntze

2022 ◽  
Author(s):  
Zheng Shuting ◽  
Dai Hongwei ◽  
Meng Qing ◽  
Huang Rui ◽  
Tong Huarong ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Analysis ◽  
Camellia Sinensis

scholarly journals Identification, characterization and expression analysis of the VQ motif-containing gene family in tea plant (Camellia sinensis)

BMC Genomics ◽  
2018 ◽  
Vol 19 (1) ◽  
Author(s):  
Junhong Guo ◽  
Jiangfei Chen ◽  
Jiankun Yang ◽  
Youben Yu ◽  
Yajun Yang ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Analysis ◽  
Camellia Sinensis ◽  
Tea Plant

scholarly journals Genome-wide identification, characterization and expression analysis of the amino acid permease gene family in tea plants (Camellia sinensis)

Genomics ◽  
2020 ◽  
Vol 112 (4) ◽  
pp. 2866-2874 ◽  
Author(s):  
Yu Duan ◽  
Xujun Zhu ◽  
Jiazhi Shen ◽  
Hongqing Xing ◽  
Zhongwei Zou ◽  
...  
Keyword(s):  
Amino Acid ◽  
Gene Family ◽  
Expression Analysis ◽  
Camellia Sinensis ◽  
Amino Acid Permease ◽  
Genome Wide ◽  
Tea Plants

scholarly journals Transcriptome-Wide Identification and Expression Analysis of the NAC Gene Family in Tea Plant [Camellia sinensis (L.) O. Kuntze]

PLoS ONE ◽  
2016 ◽  
Vol 11 (11) ◽  
pp. e0166727 ◽  
Author(s):  
Yong-Xin Wang ◽  
Zhi-Wei Liu ◽  
Zhi-Jun Wu ◽  
Hui Li ◽  
Jing Zhuang
Keyword(s):  
Gene Family ◽  
Expression Analysis ◽  
Camellia Sinensis ◽  
Tea Plant ◽  
Nac Gene Family

Cloning and Expression Analysis of Auxin Efflux Carrier GeneCsPIN3in Tea Plant(Camellia sinensis)

2016 ◽  
Vol 42 (1) ◽  
pp. 58 ◽  
Author(s):  
Bo WANG ◽  
Hong-Li CAO ◽  
Yu-Ting HUANG ◽  
Yu-Rong HU ◽  
Wen-Jun QIAN ◽  
...  
Keyword(s):  
Expression Analysis ◽  
Camellia Sinensis ◽  
Tea Plant ◽  
Cloning And Expression ◽  
Auxin Efflux Carrier

scholarly journals Genome-wide identification of cyclin-dependent kinase (CDK) genes affecting adipocyte differentiation in cattle

BMC Genomics ◽  
2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Cuili Pan ◽  
Zhaoxiong Lei ◽  
Shuzhe Wang ◽  
Xingping Wang ◽  
Dawei Wei ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Analysis ◽  
Adipocyte Differentiation ◽  
Bos Taurus ◽  
Adipogenic Differentiation ◽  
Critical Role ◽  
Bos Indicus ◽  
Specific Expression ◽  
Genome Wide ◽  
A Genome

Abstract Background Cyclin-dependent kinases (CDKs) are protein kinases regulating important cellular processes such as cell cycle and transcription. Many CDK genes also play a critical role during adipogenic differentiation, but the role of CDK gene family in regulating bovine adipocyte differentiation has not been studied. Therefore, the present study aims to characterize the CDK gene family in bovine and study their expression pattern during adipocyte differentiation. Results We performed a genome-wide analysis and identified a number of CDK genes in several bovine species. The CDK genes were classified into 8 subfamilies through phylogenetic analysis. We found that 25 bovine CDK genes were distributed in 16 different chromosomes. Collinearity analysis revealed that the CDK gene family in Bos taurus is homologous with Bos indicus, Hybrid-Bos taurus, Hybrid Bos indicus, Bos grunniens and Bubalus bubalis. Several CDK genes had higher expression levels in preadipocytes than in differentiated adipocytes, as shown by RNA-seq analysis and qPCR, suggesting a role in the growth of emerging lipid droplets. Conclusion In this research, 185 CDK genes were identified and grouped into eight distinct clades in Bovidae, showing extensively homology. Global expression analysis of different bovine tissues and specific expression analysis during adipocytes differentiation revealed CDK4, CDK7, CDK8, CDK9 and CDK14 may be involved in bovine adipocyte differentiation. The results provide a basis for further study to determine the roles of CDK gene family in regulating adipocyte differentiation, which is beneficial for beef quality improvement.

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