Construction of a damage site-specific fluorescent biosensor for single-molecule detection of DNA damage

Talanta ◽  
2021 ◽  
pp. 122809
Author(s):  
Yan Zhang ◽  
Yun Han ◽  
Xiaoran Zou ◽  
Qinfeng Xu ◽  
Fei Ma ◽  
...  
2016 ◽  
Vol 473 (9) ◽  
pp. 1237-1245 ◽  
Author(s):  
Ning Tsao ◽  
Ya-Chi Yang ◽  
Yu-Jyun Deng ◽  
Zee-Fen Chang

Cellular supply of dNTPs via RNR (ribonucleotide reductase) is crucial for DNA replication and repair. It has been shown that DNA-damage-site-specific recruitment of RNR is critical for DNA repair efficiency in quiescent cells. The catalytic function of RNR produces dNDPs. The subsequent step of dNTP formation requires the function of NDP kinase. There are ten isoforms of NDP kinase in human cells. In the present study, we identified NME3 as one specific NDP kinase that interacts directly with Tip60, a histone acetyltransferase, to form a complex with RNR. Our data reveal that NME3 recruitment to DNA damage sites depends on this interaction. Disruption of interaction of NME3 with Tip60 suppressed DNA repair in serum-deprived cells. Thus Tip60 interacts with RNR and NME3 to provide site-specific synthesis of dNTP for facilitating DNA repair in serum-deprived cells which contain low levels of dNTPs.


2021 ◽  
Vol 57 (16) ◽  
pp. 2073-2076
Author(s):  
Yan Zhang ◽  
Jinping Hu ◽  
Xiaoran Zou ◽  
Fei Ma ◽  
Jian-Ge Qiu ◽  
...  

We develop a new fluorescent biosensor for sensitive DNA methylation assay by integrating single-molecule detection with endo IV-assisted signal amplification.


2021 ◽  
Author(s):  
Li-juan Wang ◽  
Le Liang ◽  
Bing-jie Liu ◽  
BingHua Jiang ◽  
Chun-yang Zhang

A controlled T7 transcription-driven symmetric amplification cascade machinery is developed for single-molecule detection of multiple repair glycosylases.


Author(s):  
Xiaojia Jiang ◽  
Mingsong Zang ◽  
Fei Li ◽  
Chunxi Hou ◽  
Quan Luo ◽  
...  

Biological nanopore-based techniques have attracted more and more attention recently in the field of single-molecule detection, because they allow the real-time, sensitive, high-throughput analysis. Herein, we report an engineered biological...


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