Siderite/PMS conditioning-pressurized vertical electro-osmotic dewatering process for activated sludge volume reduction: evolution of protein secondary structure and typical amino acid in EPS

2021 ◽  
pp. 117352
Author(s):  
Enrui Li ◽  
Yili Wang ◽  
Daxin Zhang ◽  
Xiaoyang Fan ◽  
Zhibo Han ◽  
...  
Keyword(s):  
Amino Acid ◽  
Secondary Structure ◽  
Activated Sludge ◽  
Protein Secondary Structure ◽  
Volume Reduction

CLUSTERING OF AMINO ACIDS FOR PROTEIN SECONDARY STRUCTURE PREDICTION

2004 ◽  
Vol 02 (02) ◽  
pp. 333-342 ◽  
Author(s):  
WEI-MOU ZHENG
Keyword(s):  
Amino Acid ◽  
Secondary Structure ◽  
Structure Prediction ◽  
Markov Models ◽  
Secondary Structure Prediction ◽  
Length Distribution ◽  
Protein Secondary Structure ◽  
Coarse Graining ◽  
High Prediction ◽  
Duration Effect

Simple hidden Markov models are proposed for predicting secondary structure of a protein from its amino acid sequence. Since the length of protein conformation segments varies in a narrow range, we ignore the duration effect of length distribution, and focus on inclusion of short range correlations of residues and of conformation states in the models. Conformation-independent and -dependent amino acid coarse-graining schemes are designed for the models by means of proper mutual information. We compare models of different level of complexity, and establish a practical model with a high prediction accuracy.

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