scholarly journals SSP: An interval integer linear programming for de novo transcriptome assembly and isoform discovery of RNA-seq reads

Genomics ◽  
2013 ◽  
Vol 102 (5-6) ◽  
pp. 507-514 ◽  
Author(s):  
Zhaleh Safikhani ◽  
Mehdi Sadeghi ◽  
Hamid Pezeshk ◽  
Changiz Eslahchi
Keyword(s):  
Linear Programming ◽  
Integer Linear Programming ◽  
De Novo ◽  
Transcriptome Assembly ◽  
De Novo Transcriptome Assembly ◽  
Rna Seq ◽  
De Novo Transcriptome

scholarly journals RNA-Seq Based De Novo Transcriptome Assembly and Gene Discovery of Cistanche deserticola Fleshy Stem

PLoS ONE ◽  
2015 ◽  
Vol 10 (5) ◽  
pp. e0125722 ◽  
Author(s):  
Yuli Li ◽  
Xiliang Wang ◽  
Tingting Chen ◽  
Fuwen Yao ◽  
Cuiping Li ◽  
...  
Keyword(s):  
De Novo ◽  
Transcriptome Assembly ◽  
Gene Discovery ◽  
De Novo Transcriptome Assembly ◽  
Rna Seq ◽  
De Novo Transcriptome ◽  
Cistanche Deserticola

scholarly journals De novo transcriptome assembly of RNA-Seq reads with different strategies

2011 ◽  
Vol 54 (12) ◽  
pp. 1129-1133 ◽  
Author(s):  
Geng Chen ◽  
KangPing Yin ◽  
Charles Wang ◽  
TieLiu Shi
Keyword(s):  
De Novo ◽  
Transcriptome Assembly ◽  
De Novo Transcriptome Assembly ◽  
Rna Seq ◽  
De Novo Transcriptome

scholarly journals RNA-Seq analysis and de novo transcriptome assembly of Cry toxin susceptible and tolerant Achaea janata larvae

2019 ◽  
Vol 6 (1) ◽  
Author(s):  
Narender K. Dhania ◽  
Vinod K. Chauhan ◽  
R. K. Chaitanya ◽  
Aparna Dutta-Gupta
Keyword(s):  
De Novo ◽  
Transcriptome Assembly ◽  
De Novo Transcriptome Assembly ◽  
Rna Seq ◽  
De Novo Transcriptome ◽  
Cry Toxin ◽  
Achaea Janata

scholarly journals RNA-Seq Analysis Using De Novo Transcriptome Assembly as a Reference for the Salmon Louse Caligus rogercresseyi

PLoS ONE ◽  
2014 ◽  
Vol 9 (4) ◽  
pp. e92239 ◽  
Author(s):  
Cristian Gallardo-Escárate ◽  
Valentina Valenzuela-Muñoz ◽  
Gustavo Nuñez-Acuña
Keyword(s):  
De Novo ◽  
Transcriptome Assembly ◽  
De Novo Transcriptome Assembly ◽  
Rna Seq ◽  
De Novo Transcriptome ◽  
Salmon Louse

De novo transcriptome assembly and RNA-Seq expression analysis in blood from beluga whales of Bristol Bay, AK

2017 ◽  
Vol 35 ◽  
pp. 77-92 ◽  
Author(s):  
Jeanine S. Morey ◽  
Kathy A. Burek Huntington ◽  
Michelle Campbell ◽  
Tonya M. Clauss ◽  
Caroline E. Goertz ◽  
...  
Keyword(s):  
Expression Analysis ◽  
De Novo ◽  
Transcriptome Assembly ◽  
De Novo Transcriptome Assembly ◽  
Rna Seq ◽  
De Novo Transcriptome ◽  
Bristol Bay ◽  
Beluga Whales
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