scholarly journals Replacement of lysine 234 affects transition state stabilization in the active site of beta-lactamase TEM1.

1991 ◽  
Vol 266 (26) ◽  
pp. 17187-17194
Author(s):  
F. Lenfant ◽  
R. Labia ◽  
J.M. Masson
2008 ◽  
Vol 389 (2) ◽  
pp. 163-167 ◽  
Author(s):  
Branka Salopek-Sondi ◽  
Bojana Vukelić ◽  
Jasminka Špoljarić ◽  
Šumski Šimaga ◽  
Dušica Vujaklija ◽  
...  

Abstract Human dipeptidyl peptidase III (DPP III) is a member of the metallopeptidase family M49 with an implied role in the pain-modulatory system and endogenous defense against oxidative stress. Here, we report the heterologous expression of human DPP III and the site-directed mutagenesis results which demonstrate a functional role for Tyr318 at the active site of this enzyme. The substitution of Tyr318 to Phe decreased k cat by two orders of magnitude without altering the binding affinity of substrate, or of a competitive hydroxamate inhibitor designed to interact with S1 and S2 subsites. The results indicate that the conserved tyrosine could be involved in transition state stabilization during the catalytic action of M49 peptidases.


2004 ◽  
Vol 5 (4) ◽  
pp. 186-195 ◽  
Author(s):  
Pawel Kedzierski ◽  
Pawel Wielgus ◽  
Adrian Sikora ◽  
W. Sokalski ◽  
Jerzy Leszczynski

1991 ◽  
Vol 278 (3) ◽  
pp. 673-678 ◽  
Author(s):  
J Brannigan ◽  
A Matagne ◽  
F Jacob ◽  
C Damblon ◽  
B Joris ◽  
...  

The lysine-234 residue is highly conserved in beta-lactamases and in nearly all active-site-serine penicillin-recognizing enzymes. Its replacement by a histidine residue in the Streptomyces albus G class A beta-lactamase yielded an enzyme the pH-dependence of which was characterized by the appearance of a novel pK, which could be attributed to the newly introduced residue. At low pH, the kcat, value for benzylpenicillin was as high as 50% of that of the wild-type enzyme, demonstrating that an efficient active site was maintained. Both kcat. and kcat/Km dramatically decreased above pH 6 but the decrease in kcat./Km could not be attributed to larger Km values. Thus a positive charge on the side chain of residue 234 appears to be more essential for transition-state stabilization than for initial recognition of the substrate ground state.


2005 ◽  
Vol 1751 (2) ◽  
pp. 178-183 ◽  
Author(s):  
Michael J. Jourden ◽  
Paul R. Geiss ◽  
Michael J. Thomenius ◽  
Lindsay A. Horst ◽  
Melissa M. Barty ◽  
...  

10.1038/1852 ◽  
1998 ◽  
Vol 5 (9) ◽  
pp. 812-818 ◽  
Author(s):  
Valerie Notenboom ◽  
Camelia Birsan ◽  
Mark Nitz ◽  
David R. Rose ◽  
R. Antony J. Warren ◽  
...  

Biochemistry ◽  
1994 ◽  
Vol 33 (21) ◽  
pp. 6468-6474 ◽  
Author(s):  
Albert A. Smith ◽  
Dean C. Carlow ◽  
Richard Wolfenden ◽  
Steven A. Short

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