scholarly journals Effect of Aspergillus niger NBC001 on the soybean rhizosphere microbial community in a soybean cyst nematode-infested field

2021 ◽  
Vol 20 (12) ◽  
pp. 3230-3239
Author(s):  
Na JIN ◽  
Shi-ming LIU ◽  
Huan PENG ◽  
Wen-kun HUANG ◽  
Ling-an KONG ◽  
...  
Author(s):  
Alemu Mengistu ◽  
Nacer Belleloui ◽  
Prakash R. Arelli

Two infectious root diseases that cause significant yield losses worldwide in soybean [Glycine max (L.) Merr.] are charcoal rot caused by Macrophomina phaseolina (Tassi) Goid. and the soybean cyst nematode, caused by Heterodera glycines Ichinohe. The objective of this research was to evaluate resistance to charcoal rot in a set of 120 soybean accessions reported to have resistance to one or more races of soybean cyst nematode so that lines with combined resistance could be identified. These accessions were screened in infested field in 2006 and 2007. Charcoal rot severity ranged from 1 to 5, where 1 is resistant and 5 susceptible. The result showed that out of the 120 soybean accessions tested for charcoal rot resistance 12 were identified to have moderate levels of resistance, 51 had moderate susceptibility, and 60 were susceptible. Furthermore, the accessions with moderate resistance to charcoal rot had resistance for one to two races of soybean cyst nematode. Within the lines identified with moderate resistance to charcoal rot, nine had a yellow seed coat, a desirable agronomic trait. These lines can be used as parents in soybean breeding programs for developing soybean cultivars with combined resistance to both charcoal rot and soybean cyst nematode.


Plant Disease ◽  
2021 ◽  
Author(s):  
Richard Baidoo ◽  
Guiping Yan

The soybean cyst nematode (SCN) Heterodera glycines continues to be a major threat to soybean production worldwide. Morphological discrimination between SCN and other nematodes of the H. schachtii sensu stricto group is not only difficult and time-consuming, but also requires high expertise in nematode taxonomy. Molecular assays were developed to differentiate SCN from sugar beet cyst nematode (SBCN) and other nematodes; and to quantify SCN directly from DNA extracts of field soils. SCN and SBCN-specific quantitative real-time PCR (qPCR) primers were designed from a nematode-secreted CLAVATA gene and used for these assays. The primers were evaluated based on specificity, efficiency, and target specificity to SCN or SBCN using DNA from 20 isolates of SCN and 32 isolates of other plant-parasitic nematodes. A standard curve relating threshold cycle and log values of nematode numbers was generated from artificially infested soils and was used to quantify SCN in naturally infested field soils. There was a high correlation between the SCN numbers estimated from naturally infested field soils by conventional methods, and the numbers quantified using the SYBR Green I-based qPCR assay. The qPCR assay is highly specific and sensitive and provides improved SCN detection sensitivity down to 1 SCN egg in 20 g of soil (10 eggs/200 g soil). This assay is useful for efficient detection and quantification of SCN directly from field soil. Species-specific conventional PCR assays were also developed each for SCN and SBCN, alongside a qPCR assay that simultaneously discriminates SCN from SBCN. These assays require no expertise in nematode taxonomy and morphology, and may serve as useful diagnostic tools in research, diagnostic labs, and extension services for SCN management. Sensitive and accurate detection and quantification of SCN are essential for recommending effective management measures against SCN. We also investigated the impact of soil texture and nematode life stage on molecular quantification of SCN.


Plant Disease ◽  
1999 ◽  
Vol 83 (6) ◽  
pp. 591-591
Author(s):  
J. R. Smith ◽  
J. A. Chavarria-Carvajal

Soybean (Glycine max (L.) Merr.) winter nurseries have been planted in Puerto Rico at the USDA's Isabela farm for 25 consecutive years. The field has had one soybean crop each year, with a summer fallow period between winter nursery seasons. In February 1998, during an inspection of root nodulation, cysts were discovered on roots of an F2 population (Benning × Pureunkong). Microscopic examination of roots confirmed the presence of female nematodes of Heterodera glycines Ichinohe in various stages of development. No cysts were found when soil and roots were randomly sampled at various growth stages (R1 to R7) from other soybean fields in Puerto Rico (Isabela, Salinas, Lajas, and Juana Diaz). Also, no cysts were observed on roots of common bean (Phaseolus vulgaris) at growth stages R7 to R8 in a neighboring research field. However, cysts were observed on 35-day-old roots of soybean cv. Lee, common bean, and pigeon pea (Cajanas cajun) grown in the above infested soil. A race assay, slightly modified from standard protocols (3), determined that the infested soil contained race 2 of H. glycines. The infested field was rotated to sorghum during the summer of 1998 and then soybeans were planted in the 1998-1999 winter nursery. H. glycines occurs in at least 26 states of the U.S., and in Canada, Asia, and South America (1,2). References: (1) M. L. Mendes and D. W. Dickson. Plant Dis. 77:499, 1993. (2) R. D. Riggs and D. P. Schmitt. 1989. Soybean Cyst Nematode. Page 65 in: Compendium of Soybean Diseases. 3rd ed. J. B. Sinclair and P. A. Backman, eds. American Phytopathological Society, St. Paul, MN. (3) D. P. Schmitt and G. Shannon. Crop Sci. 32:275, 1992.


2020 ◽  
Vol 80 (03) ◽  
Author(s):  
Ik-Young Choi ◽  
Prakash Basnet ◽  
Hana Yoo ◽  
Neha Samir Roy ◽  
Rahul Vasudeo Ramekar ◽  
...  

Soybean cyst nematode (SCN) is one of the most damaging pest of soybean. Discovery and characterization of the genes involved in SCN resistance are important in soybean breeding. Soluble NSF attachment protein (SNAP) genes are related to SCN resistance in soybean. SNAP genes include five gene families, and 2 haplotypes of exons 6 and 9 of SNAP18 are considered resistant to the SCN. In present study the haplotypes of GmSNAP18 were surveyed and chacterized in a total of 60 diverse soybean genotypes including Korean cultivars, landraces, and wild-types. The target region of exons 6 and 9 in GmSNAP18 region was amplified and sequenced to examine nucleotide variation. Characterization of 5 haplotypes identified in present study for the GmSNAP18 gene revealed two haplotypes as resistant, 1 as susceptible and two as novel. A total of twelve genotypes showed resistant haplotypes, and 45 cultivars were found susceptible. Interestingly, the two novel haplotypes were present in 3 soybean lines. The information provided here about the haplotypic variation of GmSNAP18 gene can be further explored for soybean breeding to develop resistant varieties.


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