Natural History of Model Organisms: The big potential of the small frog Eleutherodactylus coqui

The Puerto Rican coquí frog Eleutherodactylus coqui (E. coqui) is both a cultural icon and a species with an unusual natural history that has attracted attention from researchers in a number of different fields within biology. Unlike most frogs, the coquí frog skips the tadpole stage, which makes it of interest to developmental biologists. The frog is best known in Puerto Rico for its notoriously loud mating call, which has allowed researchers to study aspects of social behavior such as vocal communication and courtship, while the ability of coquí to colonize new habitats has been used to explore the biology of invasive species. This article reviews research on the natural history of E. coqui and opportunities for future research.

Tectonic Context and Possible Triggering of the 2019–2020 Puerto Rico Earthquake Sequence

An historically unprecedented seismic moment was released by crustal events of the 2019–2020 earthquake sequence near southwest Puerto Rico. The sequence involved at least two, and perhaps three interacting fault systems. The largest Mw 6.4 event was likely triggered by left lateral strike-slip events along the eastern extension of the North Boquerón Bay-Punta Montalva fault zone. The mainshock occurred in a normal fault zone that extends into a region where previous studies documented extensional deformation, beyond the Ponce fault and the Bajo Tasmanian fault. Coulomb stress changes by the mainshock may have triggered further normal-faulting aftershocks, left lateral strike-slip events in the region where these two fault zones interacted, and possibly right lateral strike-slip aftershocks along a third structure extending southward, the Guayanilla fault zone. Extension directions of the seismic sequence are consistently north-northwest–south-southeast-oriented, in agreement with the Global Navigation Satellite Systems-inferred motion direction of eastern Hispaniola relative to western Puerto Rico, and with crustal stress estimates for the overriding plate boundary zone.

Maternal Metals/Metalloid Blood Levels Are Associated With Lipidomic Profiles Among Pregnant Women in Puerto Rico

Background/Aim: The association between heavy metal exposure and adverse birth outcomes is well-established. However, there is a paucity of research identifying biomarker profiles that may improve the early detection of heavy metal-induced adverse birth outcomes. Because lipids are abundant in our body and associated with important signaling pathways, we assessed associations between maternal metals/metalloid blood levels with lipidomic profiles among 83 pregnant women in the Puerto Rico PROTECT birth cohort.Methods: We measured 10 metals/metalloid blood levels during 24–28 weeks of pregnancy. Prenatal plasma lipidomic profiles were identified by liquid chromatography–mass spectrometry-based shotgun lipidomics. We derived sums for each lipid class and sums for each lipid sub-class (saturated, monounsaturated, polyunsaturated), which were then regressed on metals/metalloid. False discovery rate (FDR) adjusted p-values (q-values) were used to account for multiple comparisons.Results: A total of 587 unique lipids from 19 lipid classes were profiled. When controlling for multiple comparisons, we observed that maternal exposure to manganese and zinc were negatively associated with plasmenyl-phosphatidylethanolamine (PLPE), particularly those containing polyunsaturated fatty acid (PUFA) chains. In contrast to manganese and zinc, arsenic and mercury were positively associated with PLPE and plasmenyl-phosphatidylcholine (PLPC).Conclusion: Certain metals were significantly associated with lipids that are responsible for the biophysical properties of the cell membrane and antioxidant defense in lipid peroxidation. This study highlighted lipid-metal associations and we anticipate that this study will open up new avenues for developing diagnostic tools.

Genetic diversity and selection in Puerto Rican horses

Since the first Spanish settlers brought horses to America centuries ago, several local varieties and breeds have been established in the New World. These were generally a consequence of the admixture of the different breeds arriving from Europe. In some instances, local horses have been selectively bred for specific traits, such as appearance, endurance, strength, and gait. We looked at the genetics of two breeds, the Puerto Rican Non-Purebred (PRNPB) (also known as the “Criollo”) horses and the Puerto Rican Paso Fino (PRPF), from the Caribbean Island of Puerto Rico. While it is reasonable to assume that there was a historic connection between the two, the genetic link between them has never been established. In our study, we started by looking at the genetic ancestry and diversity of current Puerto Rican horse populations using a 668 bp fragment of the mitochondrial DNA D-loop (HVR1) in 200 horses from 27 locations on the island. We then genotyped all 200 horses in our sample for the “gait-keeper” DMRT3 mutant allele previously associated with the paso gait especially cherished in this island breed. We also genotyped a subset of 24 samples with the Illumina Neogen Equine Community genome-wide array (65,000 SNPs). This data was further combined with the publicly available PRPF genomes from other studies. Our analysis show an undeniable genetic connection between the two varieties in Puerto Rico, consistent with the hypothesis that PRNPB horses represent the descendants of the original genetic pool, a mix of horses imported from the Iberian Peninsula and elsewhere in Europe. Some of the original founders of PRNRB population must have carried the “gait-keeper” DMRT3 allele upon arrival to the island. From this admixture, the desired traits were selected by the local people over the span of centuries. We propose that the frequency of the mutant “gait-keeper” allele originally increased in the local horses due to the selection for the smooth ride and other characters, long before the PRPF breed was established. To support this hypothesis, we demonstrate that PRNPB horses, and not the purebred PRPF, carry a signature of selection in the genomic region containing the DMRT3 locus to this day. The lack of the detectable signature of selection associated with the DMRT3 in the PRPF would be expected if this native breed was originally derived from the genetic pool of PRNPB horses established earlier and most of the founders already had the mutant allele. Consequently, selection specific to PRPF later focused on allels in other genes (including CHRM5, CYP2E1, MYH7, SRSF1, PAM, PRN and others) that have not been previously associated with the prized paso gait phenotype in Puerto Rico or anywhere else.

Hurricanes Substantially Reduce the Nutrients in Tropical Forested Watersheds in Puerto Rico

Because nutrients including nitrogen and phosphorus are generally limited in tropical forest ecosystems in Puerto Rico, a quantitative understanding of the nutrient budget at a watershed scale is required to assess vegetation growth and predict forest carbon dynamics. Hurricanes are the most frequent disturbance in Puerto Rico and play an important role in regulating lateral nitrogen and phosphorus exports from the forested watershed. In this study, we selected seven watersheds in Puerto Rico to examine the immediate and lagged effects of hurricanes on nitrogen and phosphorous exports. Our results suggest that immediate surges of heavy precipitation associated with hurricanes accelerate nitrogen and phosphorus exports as much as 297 ± 113 and 306 ± 70 times than the long-term average, respectively. In addition, we estimated that it requires approximately one year for post-hurricane riverine nitrogen and phosphorus concentrations to recover to pre-hurricane levels. During the recovery period, the riverine nitrogen and phosphorus concentrations are 30 ± 6% and 28 ± 5% higher than the pre-hurricane concentrations on average.