scholarly journals Taxonomy is important in conservation: a preliminary reassessment of Philippine species-level bird taxonomy

2006 ◽  
Vol 16 (2) ◽  
pp. 155-173 ◽  
Author(s):  
A. TOWNSEND PETERSON
Keyword(s):  
Species Concept ◽  
Careful Analysis ◽  
Biological Species ◽  
Species Level ◽  
Basic Unit ◽  
Biological Species Concept ◽  
First Pass ◽  
Species Lists ◽  
Alternative Species ◽  
Bird Taxonomy

Alpha taxonomy involves delineation of the basic unit of biology: the species. The concepts by which we define species, however, have been controversial, with several alternatives competing at present, some creating fewer and some more species units, depending on interpretation of species limits. Although it is tempting to assume that species concepts would have little interaction with the geographic foci of species richness and endemism — and some have so argued — this assumption does not withstand careful analysis. In this paper, I develop a first-pass assessment of Philippine bird taxonomy under an alternative species concept, and compare the results with the traditional biological species concept lists. Differences between the two lists were dramatic, but not just in numbers of species; rather, new, previously unrecognized or previously underappreciated foci of endemism were noted. A thorough understanding of the taxonomic basis of species lists is therefore critical to conservation planning.

scholarly journals Group selection and the development of the biological species concept

2010 ◽  
Vol 365 (1547) ◽  
pp. 1853-1863 ◽  
Author(s):  
James Mallet
Keyword(s):  
Species Concept ◽  
Biological Species ◽  
Second World War ◽  
Species Level ◽  
Biological Species Concept ◽  
Ernst Mayr ◽  
World War ◽  
Mutualistic Interaction ◽  
Theodosius Dobzhansky ◽  
Second World

The development of what became known as the biological species concept began with a paper by Theodosius Dobzhansky in 1935, and was amplified by a mutualistic interaction between Dobzhansky, Alfred Emerson and Ernst Mayr after the second world war. By the 1950s and early 1960s, these authors had developed an influential concept of species as coadapted genetic complexes at equilibrium. At this time many features of species were seen as group advantages maintained by selection to avoid breakdown of beneficial coadaptation and the ‘gene pool’. Speciation thus seemed difficult. It seemed to require, more so than today, an external deus ex machina , such as allopatry or the founder effect, rather than ordinary within-species processes of natural selection, sexual selection, drift and gene flow. In the mid-1960s, the distinctions between group and individual selection were clarified. Dobzhansky and Mayr both understood the implications, but their views on species changed little. These group selectionist ideas now seem peculiar, and are becoming distinctly less popular today. Few vestiges of group selectionism and species-level adaptationism remain in recent reviews of speciation. One wonders how many of our own cherished views on evolution will seem as odd to future biologists.

scholarly journals An alternative species taxonomy of the birds of Mexico

2004 ◽  
Vol 4 (2) ◽  
pp. 1-32 ◽  
Author(s):  
Adolfo G. Navarro-Sigüenza ◽  
A. Townsend Peterson
Keyword(s):  
Species Concept ◽  
Bird Species ◽  
Biological Species ◽  
Species Concepts ◽  
Biological Species Concept ◽  
Phylogenetic Species ◽  
Phylogenetic Species Concept ◽  
Alternative Species ◽  
Species Taxonomy

Extensive debate has surrounded the application of alternative species concepts in Ornithology. The biological species concept (BSC) and phylogenetic species concept (PSC) have typically been set in opposition, with extensive debate on the relative merits of each. An alternative is the evolutionary species concept (ESC), which offers a perspective similar to that of the PSC, yet with several significant differences. To date, no major avifauna has been examined and compared among taxonomic viewpoints. Herein, we develop an alternative phylogenetic/evolutionary species taxonomy to the current BSC treatment for the more than 1000 bird species of Mexico. A total of 135 biological species was divided to produce a total of 323 phylogenetic/evolutionary species, 122 of which represent “new” endemic forms in Mexico.

Discriminating arboviral species

2021 ◽  
Vol 102 (4) ◽  
Author(s):  
Yiyuan Li ◽  
Angela C. O’Donnell ◽  
Howard Ochman
Keyword(s):  
Evolutionary History ◽  
Viral Vectors ◽  
Species Concept ◽  
International Committee ◽  
Biological Species ◽  
Biological Species Concept ◽  
Substantial Variation ◽  
Artificial Boundaries ◽  
Human Infections

Mosquito-borne arboviruses, including a diverse array of alphaviruses and flaviviruses, lead to hundreds of millions of human infections each year. Current methods for species-level classification of arboviruses adhere to guidelines prescribed by the International Committee on Taxonomy of Viruses (ICTV), and generally apply a polyphasic approach that might include information about viral vectors, hosts, geographical distribution, antigenicity, levels of DNA similarity, disease association and/or ecological characteristics. However, there is substantial variation in the criteria used to define viral species, which can lead to the establishment of artificial boundaries between species and inconsistencies when inferring their relatedness, variation and evolutionary history. In this study, we apply a single, uniform principle – that underlying the Biological Species Concept (BSC) – to define biological species of arboviruses based on recombination between genomes. Given that few recombination events have been documented in arboviruses, we investigate the incidence of recombination within and among major arboviral groups using an approach based on the ratio of homoplastic sites (recombinant alleles) to non-homoplastic sites (vertically transmitted alleles). This approach supports many ICTV-designations but also recognizes several cases in which a named species comprises multiple biological species. These findings demonstrate that this metric may be applied to all lifeforms, including viruses, and lead to more consistent and accurate delineation of viral species.

scholarly journals Putting the Biological Species Concept to the Test: Using Mating Networks to Delimit Species

PLoS ONE ◽  
2013 ◽  
Vol 8 (6) ◽  
pp. e68267 ◽  
Author(s):  
Lélia Lagache ◽  
Jean-Benoist Leger ◽  
Jean-Jacques Daudin ◽  
Rémy J. Petit ◽  
Corinne Vacher
Keyword(s):  
Species Concept ◽  
Biological Species ◽  
Biological Species Concept

Fern nothogenera and ×Lepinema, a new hybrid genus between Ellipinema and Lepisorus (Polypodiaceae)

Phytotaxa ◽  
2020 ◽  
Vol 455 (4) ◽  
pp. 262-266
Author(s):  
LIANG ZHANG ◽  
LI-BING ZHANG
Keyword(s):  
Species Concept ◽  
Intergeneric Hybrid ◽  
Molecular Data ◽  
Biological Species ◽  
Biological Species Concept

The biological species concept is not exclusively applicable in many groups of organisms including ferns. Interspecific fern hybrids are not rare: there are 16 intergeneric hybrid genera in ferns confirmed with molecular data. Here we add one more hybrid genus in the tribe Lepisoreae of Polypodiaceae, ×Lepinema, formed via hybridization between parents in two genera: Ellipinema and Lepisorus.

scholarly journals Systematics and bird conservation policies: the importance of species limits

2009 ◽  
Vol 20 (2) ◽  
pp. 176-185 ◽  
Author(s):  
OCTAVIO R. ROJAS-SOTO ◽  
ADOLFO G. NAVARRO-SIGÜENZA ◽  
ALEJANDRO ESPINOSA DE LOS MONTEROS
Keyword(s):  
Endangered Species ◽  
Species Concept ◽  
Valid Species ◽  
Biological Species Concept ◽  
Bird Conservation ◽  
Phylogenetic Species ◽  
Species Limits ◽  
Species List ◽  
Phylogenetic Species Concept ◽  
Species Lists

SummaryThe taxonomic criteria used as bases for endangered species lists can affect conservation policy decisions. We emphasize that the use of different taxonomic units affects the baselines of such lists. Recent taxonomic reviews for the Mexican avifauna provided the tools for assessing this effect on a highly diverse avifauna which is currently in need of serious conservation actions. Most ornithologists have used a taxonomy based on the biological species concept (BSC) to make decisions on species limits and therefore to set them into endangered species lists. However, the application of the phylogenetic species concept (PSC) as an alternative for delimiting species, results in a different panorama of what should be protected. Our analysis shows that the current official Mexican endangered species list, BSC based, encompasses 371 birds, ranked as 277 species and 94 subspecies. The same list of protected forms changes under the phylogenetic species concept because 47 of them are not recognized as valid species, while another 28 forms merit higher levels of protection. Additionally, under this concept another 11 forms should be candidates for inclusion based on their restricted distribution. We call attention to the fact that the use of one or another species concept affects endangered species lists.

The increasing multiplicity of the species concepts

2005 ◽  
Vol 176 (2) ◽  
pp. 221-225
Author(s):  
Jean Génermont
Keyword(s):  
Species Concept ◽  
Cladistic Analysis ◽  
Biological Species ◽  
Point Of View ◽  
Biological Species Concept ◽  
Phylogenetic Species ◽  
Phylogenetic Species Concept ◽  
Ecological Criteria ◽  
Stem Species ◽  
Definition Of

Abstract In 1980, Henri Tintant advocated the usefulness of the biological species concept in paleontology. At this time, this concept was still accepted by many neontologists, but it was already rather severely criticized by some others. In fact, a lot of new concepts appeared in the course of the following two decades. While a few ones are mere adjustments of the biological concept, for instance taking in account ecological criteria, in such a way that it could be applied to clonal organisms, some others, which were developed in connexion with the cladistic theory of taxonomy, are truly new from a conceptual point of view. The diagnosable version of the phylogenetic species concept is somewhat reminiscent of Simpson’s evolutionary species concept, since it accepts phyletic speciation as well as survival of the stem species after a cladogenetic event. One of its more criticizable features, from a cladistic point of view, is that the species are not necessarilly monophyletic. On another hand, according to the monophyly version of the phylogenetic species concept, species are recognized rather subjectively as monophyletic taxa revealed by some previous cladistic analysis dealing with operational taxonomic units. A consensus on the definition of species cannot be expected, since all concepts related to the biological one are founded on population grouping on the basis of potentially identical evolutionary fates, while those which are related to cladistic taxonomy are exclusively concerned with historical features.

scholarly journals Collembola, the biological species concept and the underestimation of global species richness

2013 ◽  
Vol 22 (21) ◽  
pp. 5382-5396 ◽  
Author(s):  
Francesco Cicconardi ◽  
Pietro P. Fanciulli ◽  
Brent C. Emerson
Keyword(s):  
Species Richness ◽  
Species Concept ◽  
Biological Species ◽  
Biological Species Concept

scholarly journals Predictors of Taxonomic Inflation and its Role in Primate Conservation

2021 ◽  
Author(s):  
Maria J.A. Creighton ◽  
Alice Q. Luo ◽  
Simon M. Reader ◽  
Arne Ø. Mooers
Keyword(s):  
Perceived Risk ◽  
Species Concept ◽  
Research Effort ◽  
Biological Species ◽  
Primate Species ◽  
Biological Species Concept ◽  
Primate Conservation ◽  
Phylogenetic Species Concept ◽  
Initial Application ◽  
Positive Message

ABSTRACTSpecies are the main unit used to measure biodiversity, but different preferred diagnostic criteria can lead to very different delineations. For instance, named primate species have more than doubled since 1982. Such increases have been termed “taxonomic inflation” and have been attributed to the widespread adoption of the ‘phylogenetic species concept’ (PSC) in preference to the previously popular ‘biological species concept’ (BSC). Criticisms of the PSC have suggested taxonomic inflation may be biased toward particular taxa and have unfavourable consequences for conservation. Here, we explore predictors of taxonomic inflation across primate taxa since the initial application of the PSC nearly 40 years ago. We do not find evidence that diversification rate, the rate of lineage formation over evolutionary time, is linked to inflation, contrary to expectations if the PSC identifies incipient species. We also do not find evidence of research effort in fields where work has been suggested to motivate splitting being associated with increases in species numbers among genera. To test the suggestion that splitting groups is likely to increase their perceived risk of extinction, we test whether genera that have undergone more splitting have also observed a greater increase in their proportion of threatened species since the introduction of the PSC. We find no cohesive signal of inflation leading to higher threat probabilities across primate genera. Overall, this analysis sends a positive message that threat statuses of primate species are not being overwhelmingly affected by splitting in line with what has recently been reported for birds. Regardless, we echo warnings that it is unwise for conservation to be reliant on taxonomic stability. Species (however defined) are not independent from one another, thus, monitoring and managing them as such may not meet the overarching goal of conserving biodiversity.

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