Protein Interaction Network Reconstruction with a Structural Gated Attention Deep Model by Incorporating Network Structure Information

Interaction Network ◽

Network Reconstruction ◽

Structure Information ◽

Deep Model

Protein Interaction Network Reconstruction Through Ensemble Deep Learning With Attention Mechanism

Frontiers in Bioengineering and Biotechnology ◽

10.3389/fbioe.2020.00390 ◽

2020 ◽

Vol 8 ◽

Author(s):

Feifei Li ◽

Fei Zhu ◽

Xinghong Ling ◽

Quan Liu

Keyword(s):

Deep Learning ◽

Protein Interaction ◽

Interaction Network ◽

Network Reconstruction ◽

Attention Mechanism

SEBINI-CABIN: An Analysis Pipeline for Biological Network Inference, with a Case Study in Protein-Protein Interaction Network Reconstruction

Sixth International Conference on Machine Learning and Applications (ICMLA 2007) ◽

10.1109/icmla.2007.63 ◽

2007 ◽

Cited By ~ 1

Author(s):

Ronald C. Taylor ◽

Jason McDermott ◽

W. Hayes McDonald ◽

Dale Pelletier ◽

Denise Schmoyer ◽

...

Keyword(s):

Protein Interaction ◽

Network Inference ◽

Biological Network ◽

Interaction Network ◽

Network Reconstruction ◽

Analysis Pipeline ◽

Faculty Opinions recommendation of Evidence for dynamically organized modularity in the yeast protein-protein interaction network.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1020099.229440 ◽

2004 ◽

Author(s):

Benoit Coulombe

Keyword(s):

Protein Interaction ◽

Interaction Network ◽

Yeast Protein ◽

Faculty Opinions recommendation of A quantitative protein interaction network for the ErbB receptors using protein microarrays.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1029121.343554 ◽

2005 ◽

Author(s):

Sachdev Sidhu

Keyword(s):

Protein Interaction ◽

Interaction Network ◽

Protein Microarrays ◽

Erbb Receptors

Faculty Opinions recommendation of Interaction between intrinsically disordered proteins frequently occurs in a human protein-protein interaction network.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1164197.624888 ◽

2009 ◽

Author(s):

Vladimir Uversky

Keyword(s):

Protein Interaction ◽

Intrinsically Disordered Proteins ◽

Interaction Network ◽

Human Protein ◽

Disordered Proteins ◽

Intrinsically Disordered ◽

Faculty Opinions recommendation of Mapping a dynamic innate immunity protein interaction network regulating type I interferon production.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.13335981.14702151 ◽

2011 ◽

Author(s):

Ralf Bartenschlager ◽

Marco Binder

Keyword(s):

Innate Immunity ◽

Protein Interaction ◽

Type I Interferon ◽

Interaction Network ◽

Type I ◽

Interferon Production ◽

Immunity Protein

Faculty Opinions recommendation of Extreme multifunctional proteins identified from a human protein interaction network.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.725542134.793507289 ◽

2015 ◽

Author(s):

Sheila McCormick

Keyword(s):

Protein Interaction ◽

Interaction Network ◽

Human Protein ◽

Multifunctional Proteins ◽

Human Protein Interaction

Analysis and Prediction of Protein Interaction Network ofRalstonia solanacearum

Chinese Journal of Appplied Environmental Biology ◽

10.3724/sp.j.1145.2012.00139 ◽

2012 ◽

Vol 18 (1) ◽

pp. 139

Author(s):

Chunlei JIANG ◽

rui ZHAO ◽

Lingfeng Lü ◽

Dairong QIAO ◽

Yi CAO

Keyword(s):

Protein Interaction ◽

Interaction Network

Predicting Protein Interaction Network Perturbation by Alternative Splicing with Semi-Supervised Learning

SSRN Electronic Journal ◽

10.2139/ssrn.3650349 ◽

2020 ◽

Author(s):

Olksandr Narykov ◽

Nathan Johnson ◽

Dmitry Korkin

Keyword(s):

Alternative Splicing ◽

Supervised Learning ◽

Protein Interaction ◽

Interaction Network

Diabetic Retinopathy and Laser Therapy in Rats: A Protein-Protein Interaction Network Analysis

Journal of lasers in medical sciences ◽

10.15171/jlms.2017.s4 ◽

2017 ◽

Vol 8 (Suppl 1) ◽

pp. S20-S21 ◽

Cited By ~ 10

Author(s):

Akram Safaei ◽

Mostafa Rezaei Tavirani ◽

Mona Zamanian Azodi ◽

Alireza Lashay ◽

Seyed Farzad Mohammadi ◽

...

Keyword(s):

Diabetic Retinopathy ◽

Network Analysis ◽

Laser Therapy ◽

Protein Interaction ◽

Interaction Network ◽