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Global profiling of RNA-binding protein target sites by LACE-seq
Nature Cell Biology
◽
10.1038/s41556-021-00696-9
◽
2021
◽
Vol 23
(6)
◽
pp. 664-675
Author(s):
Ruibao Su
◽
Li-Hua Fan
◽
Changchang Cao
◽
Lei Wang
◽
Zongchang Du
◽
...
Keyword(s):
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Protein Target
◽
Target Sites
Download Full-text
Related Documents
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References
In Vivo and Transcriptome-wide Identification of RNA Binding Protein Target Sites
Molecular Cell
◽
10.1016/j.molcel.2011.11.009
◽
2011
◽
Vol 44
(5)
◽
pp. 828-840
◽
Cited By ~ 115
Author(s):
Anna-Carina Jungkamp
◽
Marlon Stoeckius
◽
Desirea Mecenas
◽
Dominic Grün
◽
Guido Mastrobuoni
◽
...
Keyword(s):
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Protein Target
◽
Target Sites
Download Full-text
PAR-CLIP and streamlined small RNA cDNA library preparation protocol for the identification of RNA binding protein target sites
Methods
◽
10.1016/j.ymeth.2016.11.009
◽
2017
◽
Vol 118-119
◽
pp. 41-49
◽
Cited By ~ 20
Author(s):
Daniel Benhalevy
◽
Hannah L. McFarland
◽
Aishe A. Sarshad
◽
Markus Hafner
Keyword(s):
Cdna Library
◽
Small Rna
◽
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Library Preparation
◽
Protein Target
◽
Target Sites
◽
Cdna Library Preparation
◽
Library Preparation Protocol
Download Full-text
Faculty Opinions recommendation of Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.2898963.2567062
◽
2010
◽
Author(s):
Lucio Comai
◽
Sonali Jog
Keyword(s):
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Microrna Target
◽
Target Sites
Download Full-text
Genome-wide landscape of RNA-binding protein target site dysregulation reveals a major impact on psychiatric disorder risk
Nature Genetics
◽
10.1038/s41588-020-00761-3
◽
2021
◽
Vol 53
(2)
◽
pp. 166-173
Author(s):
Christopher Y. Park
◽
Jian Zhou
◽
Aaron K. Wong
◽
Kathleen M. Chen
◽
Chandra L. Theesfeld
◽
...
Keyword(s):
Psychiatric Disorder
◽
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Target Site
◽
Protein Target
◽
Genome Wide
◽
Disorder Risk
Download Full-text
CapR: revealing structural specificities of RNA-binding protein target recognition using CLIP-seq data
Genome Biology
◽
10.1186/gb-2014-15-1-r16
◽
2014
◽
Vol 15
(1)
◽
pp. R16
◽
Cited By ~ 51
Author(s):
Tsukasa Fukunaga
◽
Haruka Ozaki
◽
Goro Terai
◽
Kiyoshi Asai
◽
Wataru Iwasaki
◽
...
Keyword(s):
Rna Binding
◽
Target Recognition
◽
Binding Protein
◽
Rna Binding Protein
◽
Protein Target
Download Full-text
Deep neural networks for interpreting RNA-binding protein target preferences
Genome Research
◽
10.1101/gr.247494.118
◽
2020
◽
Vol 30
(2)
◽
pp. 214-226
◽
Cited By ~ 11
Author(s):
Mahsa Ghanbari
◽
Uwe Ohler
Keyword(s):
Neural Networks
◽
Deep Neural Networks
◽
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Protein Target
Download Full-text
Faculty Opinions recommendation of Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.2898963.2572056
◽
2010
◽
Author(s):
Jeff Coller
◽
Wenqian Hu
Keyword(s):
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Microrna Target
◽
Target Sites
Download Full-text
Faculty Opinions recommendation of Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
◽
10.3410/f.2898963.14768060
◽
2011
◽
Author(s):
Terry Elton
Keyword(s):
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Microrna Target
◽
Target Sites
Download Full-text
Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
Cell
◽
10.1016/j.cell.2010.03.009
◽
2010
◽
Vol 141
(1)
◽
pp. 129-141
◽
Cited By ~ 1852
Author(s):
Markus Hafner
◽
Markus Landthaler
◽
Lukas Burger
◽
Mohsen Khorshid
◽
Jean Hausser
◽
...
Keyword(s):
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Microrna Target
◽
Target Sites
Download Full-text
235: The RNA-Binding Protein IMP3: A Novel Molecular Marker Predicts Progression of Superficial (TA and T1) Urothelial Carcinomas of Bladder
The Journal of Urology
◽
10.1016/s0022-5347(18)30500-7
◽
2007
◽
Vol 177
(4S)
◽
pp. 78-79
Author(s):
Lioudmila Sitnikova
◽
Gary Mendese
◽
Qin Lui
◽
Bruce A. Woda
◽
Di Lu
◽
...
Keyword(s):
Molecular Marker
◽
Rna Binding
◽
Binding Protein
◽
Rna Binding Protein
◽
Urothelial Carcinomas
Download Full-text
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