scholarly journals A compendium of genome-wide sequence reads from NBS (nucleotide binding site) domains of resistance genes in the common potato

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Celine Prakash ◽  
Friederike Ch Trognitz ◽  
Peter Venhuizen ◽  
Arndt von Haeseler ◽  
Bodo Trognitz
Keyword(s):  
Binding Site ◽  
Resistance Genes ◽  
Nucleotide Binding ◽  
Nucleotide Binding Site ◽  
Genome Wide ◽  
Common Potato ◽  
The Common

Systematic analysis and comparison of nucleotide-binding site disease resistance genes in maize

FEBS Journal ◽  
2012 ◽  
Vol 279 (13) ◽  
pp. 2431-2443 ◽  
Author(s):  
Ying Cheng ◽  
Xiaoyu Li ◽  
Haiyang Jiang ◽  
Wei Ma ◽  
Weiyun Miao ◽  
...  
Keyword(s):  
Disease Resistance ◽  
Binding Site ◽  
Resistance Genes ◽  
Nucleotide Binding ◽  
Nucleotide Binding Site ◽  
Disease Resistance Genes ◽  
Systematic Analysis

A superfamily of disease resistance gene analogs is located on all homoeologous chromosome groups of wheat (Triticum aestivum)

Genome ◽  
1998 ◽  
Vol 41 (6) ◽  
pp. 782-788 ◽  
Author(s):  
W Spielmeyer ◽  
M Robertson ◽  
N Collins ◽  
D Leister ◽  
P Schulze-Lefert ◽  
...  
Keyword(s):  
Disease Resistance ◽  
Binding Site ◽  
Resistance Gene ◽  
Resistance Genes ◽  
Nucleotide Binding ◽  
Nucleotide Binding Site ◽  
Resistance Gene Analogs ◽  
Leucine Rich Repeat ◽  
Homoeologous Chromosome ◽  
Entry Points

In this study, resistance gene analogs (RGAs) which were isolated from monocot crop species (wheat, barley, maize and rice) and contained conserved sequence motifs found within the nucleotide binding site - leucine rich repeat (NBS-LRR) class of resistance genes, were used to assess their distribution in the wheat genome. The RGAs showed 30-70% amino acid identity to a previously isolated monocot NBS-LRR sequence from the Cre3 locus for cereal cyst nematode (CCN) resistance in wheat. We used the RGAs as probes to identify and map loci in wheat using recombinant inbred lines of an international Triticeae mapping family. RGA loci mapped across all seven homoeologous chromosome groups of wheat. This study demonstrated that the RGA mapping approach provides potential entry points toward identifying resistance gene candidates in wheat.Key words: wheat, disease resistance genes, nucleotide binding site, leucine rich repeat, resistance gene analogs.

scholarly journals Genome-Wide Comparison of Nucleotide-Binding Site-Leucine-Rich Repeat-Encoding Genes in Arabidopsis

2011 ◽  
Vol 157 (2) ◽  
pp. 757-769 ◽  
Author(s):  
Ya-Long Guo ◽  
Joffrey Fitz ◽  
Korbinian Schneeberger ◽  
Stephan Ossowski ◽  
Jun Cao ◽  
...  
Keyword(s):  
Binding Site ◽  
Nucleotide Binding ◽  
Nucleotide Binding Site ◽  
Leucine Rich Repeat ◽  
Genome Wide ◽  
Encoding Genes
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