scholarly journals Author Correction: Rewiring of the FtsH regulatory network by a single nucleotide change in saeS of Staphylococcus aureus

2020 ◽  
Vol 10 (1) ◽  
Author(s):  
Qian Liu ◽  
Mo Hu ◽  
Won-Sik Yeo ◽  
Lei He ◽  
Tianming Li ◽  
...  

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

2017 ◽  
Vol 7 (1) ◽  
Author(s):  
Qian Liu ◽  
Mo Hu ◽  
Won-Sik Yeo ◽  
Lei He ◽  
Tianming Li ◽  
...  

Abstract In the Gram-positive pathogen Staphylococcus aureus, the membrane-bound ATP-dependent metalloprotease FtsH plays a critical role in resistance to various stressors. However, the molecular mechanism of the FtsH functions is not known. Here, we identified core FtsH target proteins in S. aureus. In the strains Newman and USA300, the abundance of 33 proteins were altered in both strains, of which 11 were identified as core FtsH substrate protein candidates. In the strain Newman and some other S. aureus strains, the sensor histidine kinase SaeS has an L18P (T53C in saeS) substitution, which transformed the protein into an FtsH substrate. Due to the increase of SaeS L18P in the ftsH mutant, Eap, a sae-regulon protein, was also increased in abundance, causing the Newman-specific cell-aggregation phenotype. Regardless of the strain background, however, the ftsH mutants showed lower virulence and survival in a murine infection model. Our study illustrates the elasticity of the bacterial regulatory network, which can be rewired by a single substitution mutation.


Transfusion ◽  
2010 ◽  
Vol 50 (4) ◽  
pp. 856-860 ◽  
Author(s):  
Randall W. Velliquette ◽  
Zong Hu ◽  
Christine Lomas-Francis ◽  
Kim Hue-Roye ◽  
Jean L. Allen ◽  
...  

Genome ◽  
2004 ◽  
Vol 47 (2) ◽  
pp. 389-398 ◽  
Author(s):  
Joanne Russell ◽  
Allan Booth ◽  
John Fuller ◽  
Brian Harrower ◽  
Peter Hedley ◽  
...  

Direct estimates of sequence diversity provides an abundant source of DNA polymorphisms based on single nucleotide polymorphisms (SNPs). The frequency and distribution of nucleotide diversity within 23 genes associated with grain germination in barley were determined in a sample of accessions representing European cultivars, landraces, and wild barley accessions from throughout the fertile crescent. The overall nucleotide diversity ranged from 0.0021 to 0.0189 with a single nucleotide change being detected every 78 bp and insertion–deletion events being observed every 680 bp. Within the cultivated (H. vulgare) genepool, a small number of haplotypes were detected, the total number of haplotypes observed in H. spontaneum was almost double that detected in H. vulgare (46 and 26, respectively). Distinct haplotypes were observed in the H. spontaneum and landrace genepools, which are highly divergent from H. vulgare. A comparison of SNP-based haplotype data with EST-derived SSRs and genomic SSRs revealed a similar trend of decreasing variability in the cultivated genepool. However, the number of unique alleles identified in the cultivated sample was much greater with genomic SSRs (18%) compared with only 2.1% for SNPs and 3.8% for EST-derived SSRs. The potential utility of SNPs and EST-derived SSRs for association mapping in barley is discussed.Key words: SNPs, haplotype, SSRs, barley.


1988 ◽  
Vol 79 (1) ◽  
pp. 39-43 ◽  
Author(s):  
Shin Fujimori ◽  
Yuji Hidaka ◽  
Beverly L. Davidson ◽  
Thomas D. Palella ◽  
William N. Kelley

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