scholarly journals Improving the performance of the PLB index for ligand-binding site prediction using dihedral angles and the solvent-accessible surface area

2016 ◽  
Vol 6 (1) ◽  
Author(s):  
Chen Cao ◽  
Shutan Xu
Keyword(s):  
Ligand Binding ◽  
Binding Site ◽  
Surface Area ◽  
Accessible Surface Area ◽  
Solvent Accessible Surface Area ◽  
Dihedral Angles ◽  
Ligand Binding Site ◽  
Accessible Surface ◽  
Solvent Accessible Surface ◽  
Ligand Binding Site Prediction

Molecular Modeling of Surfactant Micellization Using Solvent-Accessible Surface Area

Langmuir ◽  
2019 ◽  
Vol 35 (6) ◽  
pp. 2443-2450 ◽  
Author(s):  
Hsieh Chen ◽  
Athanassios Z. Panagiotopoulos
Keyword(s):  
Molecular Modeling ◽  
Surface Area ◽  
Accessible Surface Area ◽  
Solvent Accessible Surface Area ◽  
Accessible Surface ◽  
Solvent Accessible Surface

scholarly journals CUSA and CUDE: GPU-Accelerated Methods for Estimating Solvent Accessible Surface Area and Desolvation

2009 ◽  
Vol 16 (4) ◽  
pp. 523-537 ◽  
Author(s):  
David Dynerman ◽  
Erick Butzlaff ◽  
Julie C. Mitchell
Keyword(s):  
Surface Area ◽  
Accessible Surface Area ◽  
Solvent Accessible Surface Area ◽  
Accelerated Methods ◽  
Accessible Surface ◽  
Solvent Accessible Surface

scholarly journals Solvent accessible surface area approximations for rapid and accurate protein structure prediction

2009 ◽  
Vol 15 (9) ◽  
pp. 1093-1108 ◽  
Author(s):  
Elizabeth Durham ◽  
Brent Dorr ◽  
Nils Woetzel ◽  
René Staritzbichler ◽  
Jens Meiler
Keyword(s):  
Protein Structure ◽  
Surface Area ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
Accessible Surface Area ◽  
Solvent Accessible Surface Area ◽  
Accessible Surface ◽  
Solvent Accessible Surface

scholarly journals Rapid assessment of oxidation via middle-down LCMS correlates with methionine side-chain solvent-accessible surface area for 121 clinical stage monoclonal antibodies

mAbs ◽  
2017 ◽  
Vol 9 (4) ◽  
pp. 646-653 ◽  
Author(s):  
Rong Yang ◽  
Tushar Jain ◽  
Heather Lynaugh ◽  
R. Paul Nobrega ◽  
Xiaojun Lu ◽  
...  
Keyword(s):  
Monoclonal Antibodies ◽  
Surface Area ◽  
Clinical Stage ◽  
Rapid Assessment ◽  
Accessible Surface Area ◽  
Solvent Accessible Surface Area ◽  
Side Chain ◽  
Accessible Surface ◽  
Solvent Accessible Surface
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