Network properties of decoys and CASP predicted models: a comparison with native protein structures

2013 ◽  
Vol 9 (7) ◽  
pp. 1774 ◽  
Author(s):  
S. Chatterjee ◽  
S. Ghosh ◽  
S. Vishveshwara
2014 ◽  
Vol 15 (6) ◽  
pp. 522-528 ◽  
Author(s):  
Jianhong Zhou ◽  
Wenying Yan ◽  
Guang Hu ◽  
Bairong Shen

Soft Matter ◽  
2021 ◽  
Author(s):  
Rakesh K Vaiwala ◽  
Ganapathy Ayappa

A coarse-grained force field for molecular dynamics simulations of native structures of proteins in a dissipative particle dynamics (DPD) framework is developed. The parameters for bonded interactions are derived by...


2013 ◽  
Vol 82 (4) ◽  
pp. 556-564 ◽  
Author(s):  
Jianhong Zhou ◽  
Wenying Yan ◽  
Guang Hu ◽  
Bairong Shen

2020 ◽  
Vol 19 (3) ◽  
pp. 562-570
Author(s):  
Sivani Tadepalli ◽  
Nasrin Akhter ◽  
Daniel Barbara ◽  
Amarda Shehu

2014 ◽  
Vol 106 (2) ◽  
pp. 208a
Author(s):  
Jiong Zhang ◽  
Jingfen Zhang ◽  
Dong Xu ◽  
Yi Shang ◽  
Ioan Kosztin

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