scholarly journals Impact of azole drugs on energetics, kinetics, and ligand migration pathways of CO photo-dissociation in bacterial flavohemoglobins

RSC Advances ◽  
2020 ◽  
Vol 10 (30) ◽  
pp. 17930-17941
Author(s):  
David Butcher ◽  
Myriam Moussaoui ◽  
Laura Baciou ◽  
Jaroslava Miksovska

Impact of ketoconalzole and miconazole on structural dynamics of flavohemoglobin.

PLoS ONE ◽  
2012 ◽  
Vol 7 (7) ◽  
pp. e39884 ◽  
Author(s):  
Agnese Marcelli ◽  
Stefania Abbruzzetti ◽  
Juan Pablo Bustamante ◽  
Alessandro Feis ◽  
Alessandra Bonamore ◽  
...  

2004 ◽  
Vol 109 (1) ◽  
pp. 41-58 ◽  
Author(s):  
Don C. Lamb ◽  
Alessandro Arcovito ◽  
Karin Nienhaus ◽  
Oleksandr Minkow ◽  
Federica Draghi ◽  
...  

2020 ◽  
Vol 124 (8) ◽  
pp. 1550-1556
Author(s):  
Hanui Kim ◽  
Jong Goo Kim ◽  
Srinivasan Muniyappan ◽  
Tae Wu Kim ◽  
Sang Jin Lee ◽  
...  

Biochemistry ◽  
2003 ◽  
Vol 42 (32) ◽  
pp. 9647-9658 ◽  
Author(s):  
Karin Nienhaus ◽  
Pengchi Deng ◽  
Jan M. Kriegl ◽  
G. Ulrich Nienhaus

2008 ◽  
Vol 105 (27) ◽  
pp. 9204-9209 ◽  
Author(s):  
J. Z. Ruscio ◽  
D. Kumar ◽  
M. Shukla ◽  
M. G. Prisant ◽  
T. M. Murali ◽  
...  

2017 ◽  
Vol 112 (3) ◽  
pp. 494a
Author(s):  
Antonija Tangar ◽  
Michael Goncalves ◽  
Sophie Bernad ◽  
Valerie Derrien ◽  
Pierre Sebban ◽  
...  

2010 ◽  
Vol 66 (2) ◽  
pp. 220-228 ◽  
Author(s):  
Ayana Tomita ◽  
Tokushi Sato ◽  
Shunsuke Nozawa ◽  
Shin-ya Koshihara ◽  
Shin-ichi Adachi

In order to explore the ligand-migration dynamics in myoglobin induced by photodissociation, cryogenic X-ray crystallographic investigations of carbonmonoxy myoglobin crystals illuminated by continuous wave and pulsed lasers at 1–15 kHz repetition rate have been carried out. Here it is shown that this novel method, extended pulsed-laser pumping of carbonmonoxy myoglobin, promotes ligand migration in the protein matrix by crossing the glass transition temperature repeatedly, and enables the visualization of the migration pathway of the photodissociated ligands in native Mb at cryogenic temperatures. It has revealed that the migration of the CO molecule into each cavity induces structural changes of the amino-acid residues around the cavity which result in the expansion of the cavity. The sequential motion of the ligand and the cavity suggests a self-opening mechanism of the ligand-migration channel arising by induced fit.


2019 ◽  
Vol 47 (5) ◽  
pp. 1247-1257 ◽  
Author(s):  
Mateusz Dyla ◽  
Sara Basse Hansen ◽  
Poul Nissen ◽  
Magnus Kjaergaard

Abstract P-type ATPases transport ions across biological membranes against concentration gradients and are essential for all cells. They use the energy from ATP hydrolysis to propel large intramolecular movements, which drive vectorial transport of ions. Tight coordination of the motions of the pump is required to couple the two spatially distant processes of ion binding and ATP hydrolysis. Here, we review our current understanding of the structural dynamics of P-type ATPases, focusing primarily on Ca2+ pumps. We integrate different types of information that report on structural dynamics, primarily time-resolved fluorescence experiments including single-molecule Förster resonance energy transfer and molecular dynamics simulations, and interpret them in the framework provided by the numerous crystal structures of sarco/endoplasmic reticulum Ca2+-ATPase. We discuss the challenges in characterizing the dynamics of membrane pumps, and the likely impact of new technologies on the field.


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