scholarly journals Phenology and phylogeny of Hyalomma spp. ticks infesting one-humped camels (Camelus dromedarius) in the Tunisian Saharan bioclimatic zone

Parasite ◽  
2021 ◽  
Vol 28 ◽  
pp. 44
Author(s):  
Khawla Elati ◽  
Faten Bouaicha ◽  
Mokhtar Dhibi ◽  
Boubaker Ben Smida ◽  
Moez Mhadhbi ◽  
...  
Keyword(s):  
Tick Infestation ◽  
Abiotic Factors ◽  
Cytochrome C Oxidase I ◽  
Veterinary Services ◽  
Morphological Classification ◽  
Rdna Genes ◽  
Infestation Intensity ◽  
Attachment Sites ◽  
Bioclimatic Zone

In this study, we report the results of a survey of Hyalomma ticks infesting one-humped camels in southern Tunisia. Examinations were conducted every second or third month on 406 camels in Tataouine district from April 2018 to October 2019. A total of 1902 ticks belonging to the genus Hyalomma were collected. The ticks were identified as adult H. impeltatum (41.1%; n = 782), H. dromedarii (32.9%; n = 626), H. excavatum (25.9%; n = 493), and H. marginatum for a single specimen. Although the camels were infested by ticks throughout the year, the highest overall infestation prevalence was observed in April 2018 (p < 0.01). The overall infestation intensity varied between 2.7 and 7.4 ticks/animal. There were no statistically significant differences in tick infestation prevalence based on age categories of the camels, and the overall infestation prevalence was between 82.7% and 97.4%. Female camels were significantly more infested with ticks (88.3%) than males (65.5%) (p < 0.01). The infestation prevalence of camels varied significantly according to the region where sampling took place (p < 0.01), but no correlations were found with abiotic factors. The preferred attachment sites for adult Hyalomma ticks were the sternum (38.3%; n = 729/1902), around the anus (36.2%; n = 689/1902), udder (18.4%; n = 350/1902), and inner thigh (6.9%; n = 132/1902). Morphological classification of ticks was corroborated by sequencing the cytochrome c oxidase I (Cox1) and 16S rDNA genes, and these sequences were also used to infer phylogenetic relationships. A single H. dromedarii seemed to be a natural hybrid with H. rufipes. More attention should be devoted by the veterinary services to the infestation of camels by ticks.

CLINICAL AND MORPHOLOGICAL CLASSIFICATION OF ACUTE PANCREATITIS AND ITS COMPLICATIONS

2016 ◽  
Author(s):  
S. N. Bogdanov ◽  
◽  
S. Ju. Babaev ◽  
A. V. Strazhnov ◽  
A. B. Stroganov ◽  
...  
Keyword(s):  
Acute Pancreatitis ◽  
Morphological Classification

scholarly journals Comparative Genomics: Insights on the Pathogenicity and Lifestyle of Rhizoctonia solani

2021 ◽  
Vol 22 (4) ◽  
pp. 2183
Author(s):  
Nurhani Mat Razali ◽  
Siti Norvahida Hisham ◽  
Ilakiya Sharanee Kumar ◽  
Rohit Nandan Shukla ◽  
Melvin Lee ◽  
...  
Keyword(s):  
Comparative Genomics ◽  
Rhizoctonia Solani ◽  
Abiotic Factors ◽  
Biotic Factor ◽  
Protein Coding ◽  
Sustainable Food ◽  
Repeat Elements ◽  
Gene Sets ◽  
Core Genes

Proper management of agricultural disease is important to ensure sustainable food security. Staple food crops like rice, wheat, cereals, and other cash crops hold great export value for countries. Ensuring proper supply is critical; hence any biotic or abiotic factors contributing to the shortfall in yield of these crops should be alleviated. Rhizoctonia solani is a major biotic factor that results in yield losses in many agriculturally important crops. This paper focuses on genome informatics of our Malaysian Draft R. solani AG1-IA, and the comparative genomics (inter- and intra- AG) with four AGs including China AG1-IA (AG1-IA_KB317705.1), AG1-IB, AG3, and AG8. The genomic content of repeat elements, transposable elements (TEs), syntenic genomic blocks, functions of protein-coding genes as well as core orthologous genic information that underlies R. solani’s pathogenicity strategy were investigated. Our analyses show that all studied AGs have low content and varying profiles of TEs. All AGs were dominant for Class I TE, much like other basidiomycete pathogens. All AGs demonstrate dominance in Glycoside Hydrolase protein-coding gene assignments suggesting its importance in infiltration and infection of host. Our profiling also provides a basis for further investigation on lack of correlation observed between number of pathogenicity and enzyme-related genes with host range. Despite being grouped within the same AG with China AG1-IA, our Draft AG1-IA exhibits differences in terms of protein-coding gene proportions and classifications. This implies that strains from similar AG do not necessarily have to retain similar proportions and classification of TE but must have the necessary arsenal to enable successful infiltration and colonization of host. In a larger perspective, all the studied AGs essentially share core genes that are generally involved in adhesion, penetration, and host colonization. However, the different infiltration strategies will depend on the level of host resilience where this is clearly exhibited by the gene sets encoded for the process of infiltration, infection, and protection from host.

scholarly journals CNN architecture comparison for radio galaxy classification

2021 ◽  
Vol 503 (2) ◽  
pp. 1828-1846
Author(s):  
Burger Becker ◽  
Mattia Vaccari ◽  
Matthew Prescott ◽  
Trienko Grobler
Keyword(s):  
Comparative Study ◽  
Galaxy Evolution ◽  
Radio Galaxy ◽  
Recognition Performance ◽  
Model Complexity ◽  
Great Promise ◽  
Radio Sources ◽  
Morphological Classification ◽  
Computational Performance

ABSTRACT The morphological classification of radio sources is important to gain a full understanding of galaxy evolution processes and their relation with local environmental properties. Furthermore, the complex nature of the problem, its appeal for citizen scientists, and the large data rates generated by existing and upcoming radio telescopes combine to make the morphological classification of radio sources an ideal test case for the application of machine learning techniques. One approach that has shown great promise recently is convolutional neural networks (CNNs). Literature, however, lacks two major things when it comes to CNNs and radio galaxy morphological classification. First, a proper analysis of whether overfitting occurs when training CNNs to perform radio galaxy morphological classification using a small curated training set is needed. Secondly, a good comparative study regarding the practical applicability of the CNN architectures in literature is required. Both of these shortcomings are addressed in this paper. Multiple performance metrics are used for the latter comparative study, such as inference time, model complexity, computational complexity, and mean per class accuracy. As part of this study, we also investigate the effect that receptive field, stride length, and coverage have on recognition performance. For the sake of completeness, we also investigate the recognition performance gains that we can obtain by employing classification ensembles. A ranking system based upon recognition and computational performance is proposed. MCRGNet, Radio Galaxy Zoo, and ConvXpress (novel classifier) are the architectures that best balance computational requirements with recognition performance.

Morphological classification of crista fenestra of round window corridor during pediatric cochlear implantation

2021 ◽  
pp. 110816
Author(s):  
Saad Elzayat ◽  
Hitham H. Elfarargy ◽  
Islam Soltan ◽  
Mona A. Abdel-Kareem ◽  
Maurizio Barbara ◽  
...  
Keyword(s):  
Cochlear Implantation ◽  
Round Window ◽  
Morphological Classification

Assessment of Differentiation Aspects by the Morphological Classification of Embryoid Bodies Derived from Human Embryonic Stem Cells

2011 ◽  
Vol 20 (11) ◽  
pp. 1925-1935 ◽  
Author(s):  
Jung Mo Kim ◽  
Sung-Hwan Moon ◽  
Sung Geum Lee ◽  
Youn Jeong Cho ◽  
Ki Sung Hong ◽  
...  
Keyword(s):  
Stem Cells ◽  
Embryonic Stem Cells ◽  
Human Embryonic Stem Cells ◽  
Embryonic Stem ◽  
Embryoid Bodies ◽  
Morphological Classification

Performance of the CellaVision DC-1 digital cell imaging analyser for differential counting and morphological classification of blood cell

2021 ◽  
pp. jclinpath-2021-207863
Author(s):  
Lisa N van der Vorm ◽  
Henriët A Hendriks ◽  
Simone M Smits
Keyword(s):  
Blood Cell ◽  
Peripheral Blood ◽  
Cell Imaging ◽  
Small Satellite ◽  
Morphological Classification ◽  
Clinical Sensitivity ◽  
Blood Smears ◽  
Low Volume ◽  
Peripheral Blood Smears

AimsRecently, a new automated digital cell imaging analyser (Sysmex CellaVision DC-1), intended for use in low-volume and small satellite laboratories, has become available. The purpose of this study was to compare the performance of the DC-1 with the Sysmex DI-60 system and the gold standard, manual microscopy.MethodsWhite blood cell (WBC) differential counts in 100 normal and 100 abnormal peripheral blood smears were compared between the DC-1, the DI-60 and manual microscopy to establish accuracy, within-run imprecision, clinical sensitivity and specificity. Moreover, the agreement between precharacterisation and postcharacterisation of red blood cell (RBC) morphological abnormalities was determined for the DC-1.ResultsWBC preclassification and postclassification results of the DC-1 showed good correlation compared with DI-60 results and manual microscopy. In addition, the within-run SD of the DC-1 was below 1 for all five major WBC classes, indicating good reproducibility. Clinical sensitivity and specificity were, respectively, 96.7%/95.9% compared with the DI-60% and 96.6%/95.3% compared with manual microscopy. The overall agreement on RBC morphology between the precharacterisation and postcharacterisation results ranged from 49% (poikilocytosis) to 100% (hypochromasia, microcytosis and macrocytosis).ConclusionsThe DC-1 has proven to be an accurate digital cell imaging system for differential counting and morphological classification of WBCs and RBCs in peripheral blood smears. It is a compact and easily operated instrument that can offer low-volume and small satellite laboratories the possibilities of readily available blood cell analysis that can be stored and retrieved for consultation with remote locations.

BIOMORPHOLOGICAL CHARACTERISTICS OF DENDROFLORA OF NNP «NYZHNIODNIPROVSKYI»

2021 ◽  
pp. 84-96
Author(s):  
Pavlova N.R. ◽  
Dzerkal V.M. ◽  
Ponomareva А.А.
Keyword(s):  
Life Form ◽  
Forest Type ◽  
Life Forms ◽  
Forest Steppe ◽  
Morphological Classification ◽  
Salix Alba ◽  
Plant Life Forms ◽  
Nature Park ◽  
Architectural Models

In order to preserve, reproduce and effectively use the natural complexes and objects of the DniproDelta as one of the most valuable natural floodplain-littoral complexes in Europe, which have special environmental, recreational, historical and cultural, scientific, educational and aesthetic value, and ensurethe conservationof «DniproDelta»wetland of theinternational importance,the National Natural Park «Lower Dnipro»was created(Decree of the President of Ukraine of November 24, 2015 No 657/2015).The flora of the higher vascular plants of the Park contains 820 species, 40 species of which (4.9% of the total number) are woody plants. Rosaceae Juss. (14 species), Salicaceae Mirb. (7 species), Aceraceae Juss. (3 types) are leading families of the dendroflora of the Park.Biomorphological characteristics of tree plant species in the flora of the Lower Dnipro National Nature Park were carried out according to the following classifications: 1) K. Raunkiersystem of plant life forms; 2) ecological and morphological classification of life forms of I. G. Serebryakov; 3) architectural models of F. Alle, R. Oldeman and P. Tomlinson; 4) classification of the life forms of plants of the temperate zone, which takes into account the vegetative propagation by O. V. Smirnova, L. B. Zaugolnova.AnalysisoftypesofbiomorphsaccordingtotheclassificationofK. Raunkiershowedthatthevastmajorityofdendrofloraspeciesbelongtophanerophytes, amongthem, dependingontheheightoftheplant, therearedifferentgroups-megaphanerophytes(e.g., Populustremula), mesophanerophytes(Salixalba), microphaneorphytes, nanophanerophytes(Amygdalusnana) andhamephytes(Ephedradistachia).According to the ecological and morphological classification of I. G. Serebryakov life forms, the flora of the Park is dominated by forest-steppe trees and forest-type trees.The trees which belong to one life form often differ in the principles of growth and formation of the crown, branching, and general habitus, which is generally considered as an architectural model of a particular species. According to the classification of architectural models by F. Alle, R. Oldeman and P. Tomlinson, in the flora of the Park, there are five models among which the species formed by the model of Tomlinson have a significant representation, and the species formed by the models of Manzheno and Champagne have a smaller representation.Key words:flora, tree, classification, life form, bush. З метою збереження, відтворення і ефективного використання природних комплексів та об’єктів дельти річки Дніпро як одного з найцінніших природних заплавно-літоральних комплексів у Європі, які мають особливу природоохоронну, оздоровчу, історико-культурну, наукову, освітню та естетичну цінність, забезпечення збереження водно-болотного угіддя міжнародного значення «Дельта р. Дніпро» створено Національний природний парк «Нижньодніпровський» (Указ президента України від 24 листопада 2015 року No 657/2015).Флора вищих судинних рослин Парку попередньо складає 820 видів, з них 40 видів (4,9% від загальної кількості) –деревні рослини.Провідні родини дендрофлори Парку –Rosaceae Juss. (14 видів), SalicaceaeMirb. (7 видів), AceraceaeJuss. (3 види). Біоморфологічну характеристику видів деревних рослин у флорі національного природнього парку «Нижньодніпровський» проведено за класифікаціями: 1) система життєвих форм рослин К. Раункієра; 2) еколого-морфологічна класифікація життєвих форм І. Г. Сєрєбрякова; 3) архітектурні моделі Ф. Аллє, Р. Ольдемана і П. Томлінсона; 4)класифікація життєвих форм рослин помірної зони, яка враховує вегетативне розмноження О. В. Смирнової, Л. Б. Заугольнової.Аналіз типів біоморф за класифікацією К. Раункієра показав, що переважна більшість видів дендрофлори належить до фанерофітів, серед них, в залежності від висоти рослини, виділяють різні групи –мегафанерофіти (наприклад, Populus tremula), мезофанерофіти (Salix alba), мікрофанерофіти (Amorpha fruticosa), нанофанерофіти (Amygdalus nana) та хамефіти (Ephedra distachia).За еколого-морфологічною класифікацією життєвих форм І. Г. Сєрєбрякова у флорі Парку домінують дерева лісостепового типу та дерева лісового типу.Дерева, які відносяться до однієї життєвої форми, часто відрізняютьсяпринципами наростання та формування крони, галуженням, загальним габітусом, що загалом розглядається як архітектурна модель конкретного виду. За класифікацією архітектурних моделей Ф.Аллє, Р. Ольдемана і П. Томлінсона у флорі Парку виділено п’ять моделей, серед яких, значне представництво мають види, що формуються за моделлю Томлінсона, менше представництво мають види, що формуються за моделями Манжено та Шампанії.Ключові слова: флора, дерево, класифікація, життєва форма, кущ.

Structure-function relationships in the primate superior colliculus. I. Morphological classification of efferent neurons

1988 ◽  
Vol 60 (1) ◽  
pp. 232-262 ◽  
Author(s):  
A. K. Moschovakis ◽  
A. B. Karabelas ◽  
S. M. Highstein
Keyword(s):  
Superior Colliculus ◽  
Medium Size ◽  
Cerebral Peduncle ◽  
Parent Cell ◽  
Morphological Classification ◽  
Dendritic Trees ◽  
Efferent Neurons ◽  
Recurrent Collaterals ◽  
Stimulation Of

1. Neurons in the superior colliculus (SC) of anesthetized paralyzed squirrel monkeys were injected intracellularly with horseradish peroxidase (HRP) to establish a morphological classification of tectal efferent neurons in this species. These neurons were physiologically identified by their antidromic responses following stimulation of the contralateral predorsal bundle or SC. These cells also responded with postsynaptic potentials to stimulation of the ipsilateral substantia nigra and cerebral peduncle and the contralateral tectum. 2. Quantitative light microscopic analysis of the somatodendritic profiles and axonal trajectories of 27 recovered cells revealed the existence of three major groups of tectal efferent neurons: L (n = 7), X (n = 8), and T (n = 12). 3. L neurons are small or medium size cells with relatively elaborate dendritic trees and are located mainly in the superficial layers of the SC. They participate in the ipsilateral descending and dorsal ascending tectofugal bundles. Intrinsic collaterals of L axons deploy a large number of boutons both near the parent cell body and more ventrally within the deeper tectal layers. 4. X neurons are mostly large in size and multipolar in shape with relatively complex dendritic trees. Their cell bodies are situated mainly in the stratum griseum intermedium and occasionally in the stratum opticum. Axons of X neurons participate in the crossed descending and ipsilateral ventral ascending projections of the SC. In addition, the axonal system of about half of the X neurons includes recurrent collaterals. 5. T neurons are located mainly in the ventral stratum opticum and the dorsal stratum griseum intermedium. They have small or medium-sized, trapezoid or ovoid cell bodies and relatively simple radiating or vertical dendritic trees. Their axons usually participate in two of the major tectofugal bundles besides providing a commissural component and recurrent collaterals. 6. Morphological details revealed in the present study support the notion that distinct tectofugal axonal systems originate from efferent neurons of the primate SC that differ both as to their location in the tectum as well as the appearance of their somata and dendritic trees. The resulting morphological classification of tectal efferent cells provides a framework for the analysis of tectal function in terms of populations of identified neurons.

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