scholarly journals Characterization of the Effects of Mutations in the Putative Branchpoint Sequence of Intron 4 on the Splicing within the Human Lecithin:cholesterol Acyltransferase Gene

2000 ◽  
Vol 275 (24) ◽  
pp. 18079-18084 ◽  
Author(s):  
Min Li ◽  
P. Haydn Pritchard
1999 ◽  
Vol 40 (8) ◽  
pp. 1512-1519 ◽  
Author(s):  
Jeffrey W. Chisholm ◽  
Abraham K. Gebre ◽  
John S. Parks

2004 ◽  
Vol 31 (2) ◽  
pp. 149 ◽  
Author(s):  
Claudia Stange ◽  
José Tomás Matus ◽  
Alvaro Elorza ◽  
Patricio Arce-Johnson

Nicotiana tabacum cv. Xanthi nn plants are susceptible to infection by most tobamoviruses (TMV). However, such plants display a partial hypersensitive resistance response (HR-like response) to TMV-Cg. The genetic mechanism of the HR-like response has yet not been determined, but it may involve a gene with a function similar to that of a resistance gene, responsible for HR in resistant plants. We have cloned a gene homologous to the resistance N gene, named NH, from Nicotiana Xanthi nn plants. The coding region of NH is 5.028 base pairs (bp) long and has 82.6% nucleotide identity with the N gene. In contrast to the N gene, the NH gene lacks intron 4 and does not have sites for alternative splicing of intron 3. Analysis of its sequence revealed that NH belongs to the TIR / NSB / LRR gene class. We were able to detect stable levels of NH-transcript in Nicotiana Xanthi nn plants from 0 to 18 h post-inoculation (hpi) with TMV-Cg. Transcript levels increased slightly at 24 hpi and dropped below basal values at 48 hpi. The NH transcript was also detected in a range of resistant Nicotiana plants (N. tabacum Xanthi NN, N. glutinosa, N. glauca and N. rustica) suggesting that NH is a homologue of the N gene, rather than an allele. We have cloned and characterised the NH gene (GenBank acc. no. bankit598573 AY535010) from nn susceptible plants and postulate that this gene might be involved in the HR-like response seen in these plants.


1995 ◽  
Vol 114 (2) ◽  
pp. 147-155 ◽  
Author(s):  
Takao Ohta ◽  
Rie Nakamura ◽  
Jiri J. Frohlich ◽  
P.Haydn Pritchard ◽  
Ichiro Matsuda

1983 ◽  
Vol 222 (2) ◽  
pp. 553-560 ◽  
Author(s):  
Kui-Song Chong ◽  
Shinichi Hara ◽  
Richard E. Thompson ◽  
Andras G. Lacko

1993 ◽  
Vol 34 (7) ◽  
pp. 1245-1251
Author(s):  
JS Hill ◽  
K O ◽  
X Wang ◽  
S Paranjape ◽  
D Dimitrijevich ◽  
...  

Genome ◽  
2001 ◽  
Vol 44 (4) ◽  
pp. 582-588 ◽  
Author(s):  
Liuling Yan ◽  
Mrinal Bhave

The granule-bound starch (GBSS I, waxy protein) in Triticum timopheevii (AtAtGG) and T. zhukovskyi (AtAtAzAzGG) and a diagnostic section of the genes encoding GBSS-I from the Wx-TtA and Wx-G loci of T. timopheevii and the Wx-TtA, Wx-G, and Wx-TzA loci of T. zhukovskyi were investigated in this study. The waxy proteins in these two polyploid wheats could not be separated into distinct bands, in contrast to those in the T. turgidum (AABB) – T. aestivum (AABBDD) lineage. Alignment of sequences of the section covering exon4–intron4–exon5 of the various waxy genes led to the identification of gene-specific sequences in intron 4. The sequences specific to the Wx-TtA and Wx-G genes of T. timopheevii were different from those of the Wx-A1 gene and Wx-B1 genes of T. turgidum and T. aestivum. A surprising observation was that the Wx-TzA of T. zhukovskyi did not match with the Wx-TmA of T. monococcum, a putative donor of the Az genome, but matched unexpectedly and perfectly with the Wx-B1 gene on chromosome 4A, which is proposed to have translocated from the chromosome 7B of T. aestivum. The possible genetic mechanism explaining these observations is discussed.Key words: waxy proteins, waxy genes, T. timopheevii, T. zhukovskyi, wheat evolution.


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