scholarly journals The elusive actin cytoskeleton of a green alga expressing both conventional and divergent actins

2019 ◽  
Vol 30 (22) ◽  
pp. 2827-2837 ◽  
Author(s):  
Evan W. Craig ◽  
David M. Mueller ◽  
Brae M. Bigge ◽  
Miroslava Schaffer ◽  
Benjamin D. Engel ◽  
...  
Keyword(s):  
Green Alga ◽  
Actin Filaments ◽  
Electron Tomography ◽  
Filamentous Actin ◽  
Cellular Processes ◽  
Cellular Environment ◽  
Actin Structure ◽  
Actin Isoform ◽  
Labeling Method

The green alga Chlamydomonas reinhardtii is a leading model system to study photosynthesis, cilia, and the generation of biological products. The cytoskeleton plays important roles in all of these cellular processes, but to date, the filamentous actin network within Chlamydomonas has remained elusive. By optimizing labeling conditions, we can now visualize distinct linear actin filaments at the posterior of the nucleus in both live and fixed vegetative cells. Using in situ cryo-electron tomography, we confirmed this localization by directly imaging actin filaments within the native cellular environment. The fluorescently labeled structures are sensitive to the depolymerizing agent latrunculin B (Lat B), demonstrating the specificity of our optimized labeling method. Interestingly, Lat B treatment resulted in the formation of a transient ring-like filamentous actin structure around the nucleus. The assembly of this perinuclear ring is dependent upon a second actin isoform, NAP1, which is strongly up-regulated upon Lat B treatment and is insensitive to Lat B–induced depolymerization. Our study combines orthogonal strategies to provide the first detailed visual characterization of filamentous actins in Chlamydomonas, allowing insights into the coordinated functions of two actin isoforms expressed within the same cell.

scholarly journals The elusive actin cytoskeleton of a green alga expressing both conventional and divergent actins

2019 ◽  
Author(s):  
Evan W. Craig ◽  
David M. Mueller ◽  
Miroslava Schaffer ◽  
Benjamin D. Engel ◽  
Prachee Avasthi
Keyword(s):  
Green Alga ◽  
Actin Filaments ◽  
Electron Tomography ◽  
Filamentous Actin ◽  
Cellular Processes ◽  
Cellular Environment ◽  
Actin Structure ◽  
Actin Isoform ◽  
Labeling Method

AbstractThe green alga Chlamydomonas reinhardtii is a leading model system to study photosynthesis, cilia, and the generation of biological products. The cytoskeleton plays important roles in all of these cellular processes, but to date, the filamentous actin network within Chlamydomonas has remained elusive. By optimizing labeling conditions, we can now visualize distinct linear actin filaments at the posterior of the nucleus in both live and fixed vegetative cells. Using in situ cryo-electron tomography, we confirmed this localization by directly imaging actin filaments within the native cellular environment. The fluorescently-labeled structures are sensitive to the depolymerizing agent Latrunculin B (Lat B), demonstrating the specificity of our optimized labeling method. Interestingly, Lat B treatment resulted in the formation of a transient ring-like filamentous actin structure around the nucleus. The assembly of this perinuclear ring is dependent upon a second actin isoform, NAP1, which is strongly upregulated upon Lat B treatment and is insensitive to Lat B-induced depolymerization. Our study combines orthogonal strategies to provide the first detailed visual characterization of filamentous actins in Chlamydomonas, allowing insights into the coordinated functions of two actin isoforms expressed within the same cell.

scholarly journals In situ cryo-electron tomography reveals filamentous actin within the microtubule lumen

2020 ◽  
Vol 219 (9) ◽  
Author(s):  
Danielle M. Paul ◽  
Judith Mantell ◽  
Ufuk Borucu ◽  
Jennifer Coombs ◽  
Katherine J. Surridge ◽  
...  
Keyword(s):  
Experimental Approach ◽  
Electron Tomography ◽  
Filamentous Actin ◽  
Significant Development ◽  
Cellular Processes ◽  
In Situ Study ◽  
Complex Interactions ◽  
Cryo Electron Tomography ◽  
And Migration

Microtubules and filamentous (F-) actin engage in complex interactions to drive many cellular processes from subcellular organization to cell division and migration. This is thought to be largely controlled by proteins that interface between the two structurally distinct cytoskeletal components. Here, we use cryo-electron tomography to demonstrate that the microtubule lumen can be occupied by extended segments of F-actin in small molecule–induced, microtubule-based, cellular projections. We uncover an unexpected versatility in cytoskeletal form that may prompt a significant development of our current models of cellular architecture and offer a new experimental approach for the in situ study of microtubule structure and contents.

scholarly journals In situ cryo-electron tomography reveals filamentous actin within the microtubule lumen

2019 ◽  
Author(s):  
Danielle M Paul ◽  
Judith Mantell ◽  
Ufuk Borucu ◽  
Jennifer Coombs ◽  
Katherine J Surridge ◽  
...  
Keyword(s):  
Experimental Approach ◽  
Electron Tomography ◽  
Filamentous Actin ◽  
Significant Development ◽  
Cellular Processes ◽  
Complex Interactions ◽  
Cryo Electron Tomography ◽  
And Migration ◽  
Microtubule Structure

AbstractMicrotubules and filamentous (F-) actin engage in complex interactions to drive many cellular processes from subcellular organisation to cell division and migration. This is thought to be largely controlled by proteins that interface between the two structurally distinct cytoskeletal components. Here, we use cryo-electron tomography to demonstrate that the microtubule lumen can be occupied by extended segments of F-actin in small-molecule induced, microtubule-based cellular projections. We uncover an unexpected versatility in cytoskeletal form that may prompt a significant development of our current models of cellular architecture and offer a new experimental approach for the in-situ study of microtubule structure and contents.

scholarly journals Automated cryo-lamella preparation for high-throughput in-situ structural biology

2019 ◽  
Author(s):  
Genevieve Buckley ◽  
Gediminas Gervinskas ◽  
Cyntia Taveneau ◽  
Hari Venugopal ◽  
James C. Whisstock ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Structural Biology ◽  
Focused Ion Beam ◽  
Electron Tomography ◽  
Ion Beam ◽  
Automated Method ◽  
Cellular Environment ◽  
Transmission Electron

AbstractCryo-transmission electron tomography (cryo-ET) in association with cryo-focused ion beam (cryo-FIB) milling enables structural biology studies to be performed directly within the cellular environment. Cryo-preserved cells are milled and a lamella with a thickness of 200-300 nm provides an electron transparent window suitable for cryo-ET imaging. Cryo-FIB milling is an effective method, but it is a tedious and time-consuming process, which typically results in ~10 lamellae per day. Here, we introduce an automated method to reproducibly prepare cryo-lamellae on a grid and reduce the amount of human supervision. We tested the routine on cryo-preserved Saccharomyces cerevisiae and demonstrate that this method allows an increased throughput, achieving a rate of 5 lamellae/hour without the need to supervise the FIB milling. We demonstrate that the quality of the lamellae is consistent throughout the preparation and their compatibility with cryo-ET analyses.

scholarly journals Proteasomes tether to two distinct sites at the nuclear pore complex

2017 ◽  
Vol 114 (52) ◽  
pp. 13726-13731 ◽  
Author(s):  
Sahradha Albert ◽  
Miroslava Schaffer ◽  
Florian Beck ◽  
Shyamal Mosalaganti ◽  
Shoh Asano ◽  
...  
Keyword(s):  
Nuclear Pore Complex ◽  
Binding Sites ◽  
Electron Tomography ◽  
Nuclear Pore ◽  
Cellular Environment ◽  
Subtomogram Averaging ◽  
Substrate Processing ◽  
Cellular Components ◽  
Transport Of Macromolecules

The partitioning of cellular components between the nucleus and cytoplasm is the defining feature of eukaryotic life. The nuclear pore complex (NPC) selectively gates the transport of macromolecules between these compartments, but it is unknown whether surveillance mechanisms exist to reinforce this function. By leveraging in situ cryo-electron tomography to image the native cellular environment of Chlamydomonas reinhardtii, we observed that nuclear 26S proteasomes crowd around NPCs. Through a combination of subtomogram averaging and nanometer-precision localization, we identified two classes of proteasomes tethered via their Rpn9 subunits to two specific NPC locations: binding sites on the NPC basket that reflect its eightfold symmetry and more abundant binding sites at the inner nuclear membrane that encircle the NPC. These basket-tethered and membrane-tethered proteasomes, which have similar substrate-processing state frequencies as proteasomes elsewhere in the cell, are ideally positioned to regulate transcription and perform quality control of both soluble and membrane proteins transiting the NPC.

scholarly journals Slow and steady wins the race: encounters of myosin-5 and myosin-6 on shared actin filaments

2016 ◽  
Author(s):  
Alicja Santos ◽  
Joanna Kalita ◽  
Ronald S. Rock
Keyword(s):  
Statistical Analysis ◽  
Actin Filaments ◽  
Cell Periphery ◽  
Filamentous Actin ◽  
Model Based ◽  
Cellular Environment ◽  
Pointed End

AbstractIn the cellular environment multiple myosins use the same filamentous actin (F-actin) tracks, yet little is known about how this track sharing is achieved and maintained. To assess the influence that different myosin classes have on each other, we developed an assay that combines two dynamic elements: elongating actin filaments with identified barbed and pointed ends, and myosins moving along these filaments. We studied two different myosins, myosin-5 and myosin-6. These myosins have distinct functions in the cell and are known to travel in opposite directions along actin filaments. Myosin-5 walks towards the barbed end of F-actin and generally into dynamically rearranging actin at the cell periphery. Myosin-6 is a pointed-end directed myosin that generally walks towards the cell center. We successfully reconstituted simultaneous bidirectional motility of myosin-5 and myosin-6 on single polymerizing filaments of actin. We report and provide statistical analysis of encounters between myosin-5 and myosin-6 walking along the single filaments. When myosin-5 and myosin-6 collide, myosin-5 detaches more frequently than myosin-6. The experimental observations are consistent with a stochastic stepping model based upon known myosin kinetics, which suggests that faster motors are more likely to detach.

Actin Dynamics, Architecture, and Mechanics in Cell Motility

2014 ◽  
Vol 94 (1) ◽  
pp. 235-263 ◽  
Author(s):  
Laurent Blanchoin ◽  
Rajaa Boujemaa-Paterski ◽  
Cécile Sykes ◽  
Julie Plastino
Keyword(s):  
Mechanical Properties ◽  
Actin Filaments ◽  
Molecular Motor ◽  
Actin Dynamics ◽  
Tight Coupling ◽  
Actin Organization ◽  
Cellular Processes ◽  
Shock Absorbers ◽  
Cellular Environment

Tight coupling between biochemical and mechanical properties of the actin cytoskeleton drives a large range of cellular processes including polarity establishment, morphogenesis, and motility. This is possible because actin filaments are semi-flexible polymers that, in conjunction with the molecular motor myosin, can act as biological active springs or “dashpots” (in laymen's terms, shock absorbers or fluidizers) able to exert or resist against force in a cellular environment. To modulate their mechanical properties, actin filaments can organize into a variety of architectures generating a diversity of cellular organizations including branched or crosslinked networks in the lamellipodium, parallel bundles in filopodia, and antiparallel structures in contractile fibers. In this review we describe the feedback loop between biochemical and mechanical properties of actin organization at the molecular level in vitro, then we integrate this knowledge into our current understanding of cellular actin organization and its physiological roles.

scholarly journals Revealing the polarity of actin filaments by cryo-electron tomography

2020 ◽  
Author(s):  
Bruno Martins ◽  
Simona Sorrentino ◽  
Wen-Lu Chung ◽  
Meltem Tatli ◽  
Ohad Medalia ◽  
...  
Keyword(s):  
Actin Filaments ◽  
Electron Tomography ◽  
Signal To Noise Ratio ◽  
Focal Adhesions ◽  
Mechanical Forces ◽  
Structural Imaging ◽  
High Frequencies ◽  
Cellular Processes ◽  
Cryo Electron Tomography ◽  
Adhesion Site

SummaryThe actin cytoskeleton plays a fundamental role in numerous cellular processes, such as cell motility, cytokinesis, and adhesion to the extracellular matrix. Revealing the polarity of individual actin filaments in cells, would foster an unprecedented understanding of cytoskeletal processes and their associated mechanical forces. Cryo-electron tomography provides the means for high-resolution structural imaging of cells. However, the low signal-to-noise ratio of cryo-tomograms obscures the high frequencies and therefore the polarity of actin filaments cannot be directly measured. Here, we developed an approach that enables to determine the polarity of actin filaments in cellular cryo-tomograms. We applied it to reveal the actin polarity distribution in focal adhesions, and show a linear relation between actin polarity and distance from the apical boundary of the adhesion site.

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