Computational analysis of tissue-specific gene networks: application to murine retinal functional studies

Bioinformatics ◽

10.1093/bioinformatics/btq408 ◽

2010 ◽

Vol 26 (18) ◽

pp. 2289-2297 ◽

Author(s):

Jianfei Hu ◽

Jun Wan ◽

Laszlo Hackler ◽

Donald J. Zack ◽

Jiang Qian

Keyword(s):

Gene Networks ◽

Computational Analysis ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Functional Studies

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A new version of the ANDSystem tool for automatic extraction of knowledge from scientific publications with expanded functionality for reconstruction of associative gene networks by considering tissue-specific gene expression

BMC Bioinformatics ◽

10.1186/s12859-018-2567-6 ◽

2019 ◽

Vol 20 (S1) ◽

Author(s):

Vladimir A. Ivanisenko ◽

Pavel S. Demenkov ◽

Timofey V. Ivanisenko ◽

Elena L. Mishchenko ◽

Olga V. Saik

Keyword(s):

Gene Expression ◽

Gene Networks ◽

Specific Gene ◽

Automatic Extraction ◽

Scientific Publications ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Specific Gene Expression ◽

Associative Gene Networks

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Simultaneous inference of phenotype-associated genes and relevant tissues from GWAS data via Bayesian integration of multiple tissue-specific gene networks

Journal of Molecular Cell Biology ◽

10.1093/jmcb/mjx059 ◽

2017 ◽

Vol 9 (6) ◽

pp. 436-452 ◽

Author(s):

Mengmeng Wu ◽

Zhixiang Lin ◽

Shining Ma ◽

Ting Chen ◽

Rui Jiang ◽

...

Keyword(s):

Gene Networks ◽

Gwas Data ◽

Specific Gene ◽

Simultaneous Inference ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Bayesian Integration

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Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis elegans

PLoS Computational Biology ◽

10.1371/journal.pcbi.1000417 ◽

2009 ◽

Vol 5 (6) ◽

pp. e1000417 ◽

Author(s):

Maria D. Chikina ◽

Curtis Huttenhower ◽

Coleen T. Murphy ◽

Olga G. Troyanskaya

Keyword(s):

Gene Expression ◽

Caenorhabditis Elegans ◽

Gene Networks ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Specific Gene Expression ◽

Context Dependent

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Tissue-specific gene expression shows cynipid wasps repurpose host gene networks to create complex and novel parasite-specific organs on oaks

10.22541/au.159466932.21772181 ◽

2020 ◽

Author(s):

Ellen Martinson ◽

John Werren ◽

Scott Egan

Keyword(s):

Gene Expression ◽

Gene Networks ◽

Host Gene ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Specific Gene Expression

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Tissue‐specific gene expression shows a cynipid wasp repurposes oak host gene networks to create a complex and novel parasite‐specific organ

Molecular Ecology ◽

10.1111/mec.16159 ◽

2021 ◽

Author(s):

Ellen O. Martinson ◽

John H. Werren ◽

Scott P. Egan

Keyword(s):

Gene Expression ◽

Gene Networks ◽

Host Gene ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Specific Gene Expression ◽

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Faculty Opinions recommendation of The proteasome restricts permissive transcription at tissue-specific gene loci in embryonic stem cells.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1057848.537744 ◽

2007 ◽

Author(s):

Miles Wilkinson

Keyword(s):

Embryonic Stem Cells ◽

Embryonic Stem ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene

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Faculty Opinions recommendation of The proteasome restricts permissive transcription at tissue-specific gene loci in embryonic stem cells.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1057848.509776 ◽

2007 ◽

Author(s):

Thomas Kodadek

Keyword(s):

Embryonic Stem Cells ◽

Embryonic Stem ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene

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A unique histone 3 lysine 14 chromatin signature underlies tissue-specific gene regulation

Molecular Cell ◽

10.1016/j.molcel.2021.01.041 ◽

2021 ◽

Author(s):

Isabel Regadas ◽

Olle Dahlberg ◽

Roshan Vaid ◽

Oanh Ho ◽

Sergey Belikov ◽

...

Keyword(s):

Gene Regulation ◽

Specific Gene ◽

Chromatin Signature ◽

Tissue Specific ◽

Tissue Specific Gene ◽

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Histones: genetic diversity and tissue-specific gene expression

Histochemistry and Cell Biology ◽

10.1007/s004180050083 ◽

1997 ◽

Vol 107 (1) ◽

pp. 1-10 ◽

Author(s):

D. Doenecke ◽

W. Albig ◽

C. Bode ◽

B. Drabent ◽

K. Franke ◽

...

Keyword(s):

Gene Expression ◽

Genetic Diversity ◽

Specific Gene ◽

Tissue Specific ◽

Tissue Specific Gene ◽

Specific Gene Expression

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Food Shortage Causes Differential Effects on Body Composition and Tissue-Specific Gene Expression in Salmon Modified for Increased Growth Hormone Production

Marine Biotechnology ◽

10.1007/s10126-015-9654-8 ◽

2015 ◽

Vol 17 (6) ◽

pp. 753-767 ◽

Author(s):

Jason Abernathy ◽

Stéphane Panserat ◽

Thomas Welker ◽

Elisabeth Plagne-Juan ◽

Dionne Sakhrani ◽

...

Keyword(s):

Gene Expression ◽

Growth Hormone ◽

Body Composition ◽

Food Shortage ◽

Specific Gene ◽

Hormone Production ◽

Tissue Specific ◽

Differential Effects ◽

Tissue Specific Gene ◽

Specific Gene Expression

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